Gene Pcar_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1879 
Symbol 
ID3724569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2193522 
End bp2193905 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content53% 
IMG OID637751480 
Producthypothetical protein 
Protein accessionYP_357290 
Protein GI77919475 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.000000386967 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCAA GGACGCATAA AGCGATTTCG CCCACCCTGG TGGGGGAGAT GGTGGAGCTT 
AAGGATGGTG AGGCTTCGGC GCAGCTCAAG ACCTTCGCCG ATATGTCCGC CGACGATCAC
GGTCTTGTTC ACGGTGGCTT TACATTTGGT CTTGCCGATT ATGCGGCCAT GCTTGCGGTT
AACGATCCGT TCGTCGTGTT GGGTGCAGCC GATGTTCGAT TTTTGGCCCC TGTTCGCTGC
GGTGATACCA TGAAGGCTCA CGCCATCCTC GAAAGTCGCG AAGGGAAGAA ACACAGTGTT
TTCTGTACTG TCGAGGTCGA GGGCAAGCGG GTTTTTGAGG CAACGTTTAC TTGTTTCGTG
CTGGAAAAAC ACATCCTTGA CTGA
 
Protein sequence
MQSRTHKAIS PTLVGEMVEL KDGEASAQLK TFADMSADDH GLVHGGFTFG LADYAAMLAV 
NDPFVVLGAA DVRFLAPVRC GDTMKAHAIL ESREGKKHSV FCTVEVEGKR VFEATFTCFV
LEKHILD