| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1872 |
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| Symbol | |
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| ID | 3724562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2186133 |
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| End bp | 2187917 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637751473 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_357283 |
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| Protein GI | 77919468 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0261679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTTTTG TTCCGGCATC CTATCCTCAT GTATCGTTGC CCTTCTTTTT TTCCTCAGCC
CTGTGGGGTC CTCTGATGTT CAAGCGGTGG TTGCCGTTTC TGCTTTTCAC ATTCACGCTG
GTCGGGTGTC TGTCGGAATC CGTCCCGGGT CAGGCTCTTG ACGGTGGCGA TAAAACAGCT
GCCTTGCAGC CGCATGTTTC CGTTTCCGGC AAAGCTCTTT ATCACTATGC CCGGGCCCGT
CTGCTGGCTT TGGACAATCG TTTGCCCGAG GCTGTTGCCG CTCTTGAACG GGCCATCGAT
GCCGATCCCC ATTCGGCGTA CCTGCGTATG GTCATGGCGG AAATACAGTT GGCGCGTGGC
GAAGAGAAGC TTGCCCGGCG GGCTGTTGAA GACGCCCTGA TTCAAGATCC CGATTATATC
GAAGCTCATC TGTTGCTAGG CAACCTGTTG CTGAACAGCC AGTCCTATCA AGGGGCTATC
GAGCACCTGA CCCGGGCCAT AGACCTCGAC CCGACCCTGG AGAAGGTTTA TTTGCAACTG
GCGGTTGCCT ATGTGCGCGG CGGCGCTACC GATGACGCCA TCGGTATACT GAAACGTCTT
CTGGGGCAGA ACCCTGCATC TATGGTCGGC CGCCTGGCGT TGGCGCGTCT CTATCATCAG
CTTGGTCTGA CCTCGCTGGC CGAACAGGTC TATGGCGAAT TTATCGAAAA ACATTCGCTA
CAGATACAGG GGTACGTCGA ACTCGCACAG CTCTACACGC AACTGAACAA GGGGCAGCAG
GCCCTGGCGG TTCTCAGGCG CGGGCTGACA CAGGATTTTG CCGAGGATCG TTCCCGGTAT
CCGCTGTTGC GTGCTATGGT CGAGTTGGGC TACGTTGATG AAGCGCTGGT CGAGTTGCGT
ACGATGTTGA AGGAAAATCC CCAGCGGGTT GAGGCGCAGC GGTTGTCAGG GTTGCTGCTG
TTGGAAAAGA AACAGTGGCA ACAAGCCGGG GAGGCCTTTC GGAAACTTCT GGAGATGGAT
CCGTCCCACG AGCAGGGACT GTTTTATTTA GGTTTGGTGC ACGAAAATCA GCAACAATGG
ACCGAGGCCA TCGCCACCTT TGAAAAAGTT CCGGACACGT CGGACTTTTT CCTCGATGCG
ACCAGTCATC TCGGCTATCT GTACTACCGC CAGGGACAGT TGGAAAAAGC TATTCAAGTG
TTGGAAGAAC GCTTGCAAAA ATCGCAGGGG CGGCCGCAAT TATTTTCCTT CCTGGCCAGT
CTATATCGGG AGCACAACGA AAACACCAAG GCCGGCAACT GGTTGCAGCG GGGGCTTGAA
ATATTCCCCG AATCGGCGGA ACTCTATTAC CATCGTGGCC TGTTGCGGGA AAGCGGGGGC
AATCGGAAGG GCGCACTGGA GGATATGCGC CGCGCCATCG AGCTGGACGA TAAACATTAC
GAAGCCATGA ATTTCATTGC TTACAGCTAT GCCGAGCAGG GCGAAAGTCT TGACGAAGCC
CTGACTCTTG CCCGCCAGGC TTTGCAGCTG AATAATGAAG GGCATATCCT CGATACTCTC
GGCTGGGTTC TGTTTAAATT GAAGCGCTTC GATGAGGCTC GGGGGGAACT TGAAGCCGCC
GCGGCCCTGT TGCCCCAGGA TGGCCTCGTG CAGGAACATC TTGGCGATCT ATACCGCGAA
CTCGGATTGT TGGATAAGGC TGCGGCAATT TATGGCCGGG CATTGAAACT GAGACCCCAG
GATGAAAAAT TACGGAACAA ATTACAGCAG CTCTCGCCGC ATTGA
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| Protein sequence | MRFVPASYPH VSLPFFFSSA LWGPLMFKRW LPFLLFTFTL VGCLSESVPG QALDGGDKTA
ALQPHVSVSG KALYHYARAR LLALDNRLPE AVAALERAID ADPHSAYLRM VMAEIQLARG
EEKLARRAVE DALIQDPDYI EAHLLLGNLL LNSQSYQGAI EHLTRAIDLD PTLEKVYLQL
AVAYVRGGAT DDAIGILKRL LGQNPASMVG RLALARLYHQ LGLTSLAEQV YGEFIEKHSL
QIQGYVELAQ LYTQLNKGQQ ALAVLRRGLT QDFAEDRSRY PLLRAMVELG YVDEALVELR
TMLKENPQRV EAQRLSGLLL LEKKQWQQAG EAFRKLLEMD PSHEQGLFYL GLVHENQQQW
TEAIATFEKV PDTSDFFLDA TSHLGYLYYR QGQLEKAIQV LEERLQKSQG RPQLFSFLAS
LYREHNENTK AGNWLQRGLE IFPESAELYY HRGLLRESGG NRKGALEDMR RAIELDDKHY
EAMNFIAYSY AEQGESLDEA LTLARQALQL NNEGHILDTL GWVLFKLKRF DEARGELEAA
AALLPQDGLV QEHLGDLYRE LGLLDKAAAI YGRALKLRPQ DEKLRNKLQQ LSPH
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