Gene Pcar_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1871 
Symbol 
ID3724561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2185358 
End bp2186176 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content58% 
IMG OID637751472 
Producthypothetical protein 
Protein accessionYP_357282 
Protein GI77919467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.949738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT ACGGAACAAA TTACAGCAGC TCTCGCCGCA TTGATGGCGC TAAACCAGCC 
TTGTTTGCCC TGTTTGTTCT GCTGACGGTT TTGGTGGTGG GCGGCTGTGC TCCGGTTCGT
CCGCCGACGT CGCTTCTGCC GCCTGTTTCG GCGGACACCT TATTGGCATC CTTGCAGGCA
GGGGGGCAGC GTTTTCGATC CTTGCAGGGC ATGACGGCGC TGCGGGTTAC GCACGCCGGT
GAGGAGCATG CCGTCAAGCA GGTTTTGCTG GTGCGGAGGC CGGATTTTCT GCGAGCCGAG
GTGCTTGGAC TGTTCGGCCA ACCGGTATTG ACCGTAACCG CAGCCGATGA TCGTTTGTCG
GCCCTGGTGC CCGGCGAGTC GAAATTCTAT ACCGGCCCGG CCAGTTCGGC TAACCTTTAC
CGTCTGGTGC GCCTGCCCCT CGCGCTGGAA GAGCTGGTGC CGTTCATCTT TTACGATGTT
CCCTTGCTGC CGCTGCCTTC CGGTGAAGTG GCGATTAAGG ATGGCCTTTA TCAACTCGAC
CGGTGCTCGC GTGATGGCCG TCGTCAGGAA CTGCTGTTCG ATGGAAAACT GCGTCTTCGA
CAGGCGCGAT TTTTCGCCGA CGATGTCGAA TTGTTGATGG CCGAATACGG CAATATGCGG
GACGGGGATA ATTTGCCGCA GCAATTGCAT CTGGCGTTAC CGGCTGTAGA TATGGCCATA
GATCTGGTTT GGCGGAACGT GCGCGCCAAT GTGGATATCC CGCTAAGTCG CTTTGAGCAG
TCCCCGCCTG CCGGTGTGCA GGTAGAGGCC TTGCCGTAA
 
Protein sequence
MKNYGTNYSS SRRIDGAKPA LFALFVLLTV LVVGGCAPVR PPTSLLPPVS ADTLLASLQA 
GGQRFRSLQG MTALRVTHAG EEHAVKQVLL VRRPDFLRAE VLGLFGQPVL TVTAADDRLS
ALVPGESKFY TGPASSANLY RLVRLPLALE ELVPFIFYDV PLLPLPSGEV AIKDGLYQLD
RCSRDGRRQE LLFDGKLRLR QARFFADDVE LLMAEYGNMR DGDNLPQQLH LALPAVDMAI
DLVWRNVRAN VDIPLSRFEQ SPPAGVQVEA LP