| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1852 |
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| Symbol | nrdE |
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| ID | 3724542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2167047 |
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| End bp | 2169281 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637751453 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_357263 |
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| Protein GI | 77919448 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000568553 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCA CCGCGGATCT TGCATCCCTG CTCAGCAAAA ACGCCCTCAC CGTTCTCAAG
CGCCGCTATC TCAAGCGCGA CCAGGATGGC CGGATTCTCG AAGATCCGGC GGACATGTTC
CGCCGTGTGG CCGACGCCGT GGCCGACGCC GAAACCCGAT TGGCTTCCGG CCAGGATGCC
ACATCCCTCG CCGACCGGTT TTACGACGCC ATGACCTGCC TGGAGTTTCT GCCCAACTCC
CCGACCCTGA TGAATGCCGG ACGGGAACTC GGCCAGCTGT CGGCCTGTTT CGTGCTGCCC
GTCGACGATT CCATGGAGAG CATCTTCGAG GCCATCAAAC AGACCGCCCT GATTCACAAA
AGCGGCGGCG GCACCGGCTT TTCCTTTTCA CGCATCCGCC CGGCAAACGA TGTCGTCCTG
TCCACCAAAG GCGTCTCCTC GGGACCGATC TCCTTCATGA AGGTTTTTGA TGCCGCCACC
GAGACCATCA AGCAAGGCGG CACCCGGCGC GGGGCCAACA TGGGGATTCT GCGCGTCGAC
CATCCGGATA TCATGGATTT TATTATGGTC AAAAAAGACC TTACGGTCCT GACCAATTTC
AACCTTTCCG TGGGACTGAC CGAGGCCTTC ATGAAAGCCG TGGAAGAAGG TCAGGAATAC
GATCTGCTCA ACCCGCGCAC CGGTGAACCG CTTAAAAAAC TCGATGCCCG CAAGGTCTTC
GACCGGATTA TCGACATGGC CTGGACCAGC GGTGAACCCG GAATCATCTT CCTCGATCGC
CTCAACCGCG ACAACCCGAC CCCCCATGTC GGGGAAATAG AAGCGACCAA CCCTTGCGGG
GAGCAACCGC TGCTGCCTTA CGAATCGTGC AACCTCGGCT CCATCAATCT GTCCCGCATG
GTGACCGGCG ATGGCGAAGT CGACTGGGAA AAGCTGCGTG ACACCGTTCA GTTGGGCGTA
CGTTTTCTCG ACAATGTCAT CGAGATAAAC CGCTACCCCC TGCCGCAGAT ATCGGAAATG
ACCTTGTCCA ATCGCAAAAT CGGTCTCGGC ATCATGGGCT GGGCGGACAT GTTGATACTG
CTGGGGCTGC CCTACAACAG CAGCCAGGCC ATTGCCTTGG CGGACAAACT GATGAACTTC
ATCACCACCG AAGCGCGCGC CACCTCTGTC AAACTCGCCG AACAGCGCGG CGCTTTCCCC
AATTTCCCCG GCAGCAGCTA CGATCAGGCC GGCGACGGAC CATTGCGCAA CGCCACCTGC
ACCACCATCG CCCCCACCGG AACCATCTCC ATCATTGCCA ACACCTCCAG CGGCGTGGAA
CCGATCTTTG CCGTTTCCTA CATCCGCCAG GTCATGGATA ACGACGTGCT CGTCGAGGTT
CACCCCCTGT TCGAAGCCAT CGCCCATAAA GAAGGCTTCT ACAGTCCCGA ACTGATGAAG
GCCATCGCTG AAAAAGGCAC CATCCAGGGG TTTGACGAAA TCCCCGAAAA GGTGCGTAAA
CTCTTTGTGA CCGCCCACGA CATCACCCCC GAGGATCACA TCCACATGCA GGCGGCCTTC
CAGAAACATA CGGACAATGC CGTGTCCAAA ACAGTGAATT TCCCCCACTC GGCAACGCGC
GAAGAAGTGG CCGAGGTTTA CCGCCTGGCC TATAAGGAAG GGTGCAAAGG GGTAACCATC
TATCGGGATG GCTCGCGGGA CATGCAGGTA TTGTCCGTCG CCAAAGCCGA AGAAAAACCG
GAAGAGCCCG CGATTCCCGT CGAATCGGGC AAATCCGGGC ACAAACGGGA GCGGCCCCGC
GCTCTGACCG GAAAAACCTA CCAGATGAGC ACCGGCTGCG GCCCCTTGTA CGTTACCATC
AACCAGGACA ACAGCGGTCT GTTCGAATTG TTCACCACCA TGGGCAAAGC CGGCGGATGC
GCCGCCAGCC AGTGCGAAGC CATTGGTCGG CTGGTATCGC TGGCCTGGCG CAGCGGCGTA
CAGGCGCGGC AAGTGGTCAA GCAACTGATC GGCATCACCT GCCATAAACC GGCCGGGTTC
GGTGAAAATC GGGTAACCTC CTGTGCCGAT GCGGTGGCCA GGGCGATCCT GACCCACATG
CAGATGGAAA CCGACGACGA CTCCGTGATC AAAACCGTCA ACAACGGCGG CGCCTGTCCG
GAATGCGGAG GCCCGGTCGA GCACGAGGGA GGATGCTGCG TCTGTCATGC CTGCGGCTAT
TCGGAATGTG CCTGA
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| Protein sequence | MMTTADLASL LSKNALTVLK RRYLKRDQDG RILEDPADMF RRVADAVADA ETRLASGQDA
TSLADRFYDA MTCLEFLPNS PTLMNAGREL GQLSACFVLP VDDSMESIFE AIKQTALIHK
SGGGTGFSFS RIRPANDVVL STKGVSSGPI SFMKVFDAAT ETIKQGGTRR GANMGILRVD
HPDIMDFIMV KKDLTVLTNF NLSVGLTEAF MKAVEEGQEY DLLNPRTGEP LKKLDARKVF
DRIIDMAWTS GEPGIIFLDR LNRDNPTPHV GEIEATNPCG EQPLLPYESC NLGSINLSRM
VTGDGEVDWE KLRDTVQLGV RFLDNVIEIN RYPLPQISEM TLSNRKIGLG IMGWADMLIL
LGLPYNSSQA IALADKLMNF ITTEARATSV KLAEQRGAFP NFPGSSYDQA GDGPLRNATC
TTIAPTGTIS IIANTSSGVE PIFAVSYIRQ VMDNDVLVEV HPLFEAIAHK EGFYSPELMK
AIAEKGTIQG FDEIPEKVRK LFVTAHDITP EDHIHMQAAF QKHTDNAVSK TVNFPHSATR
EEVAEVYRLA YKEGCKGVTI YRDGSRDMQV LSVAKAEEKP EEPAIPVESG KSGHKRERPR
ALTGKTYQMS TGCGPLYVTI NQDNSGLFEL FTTMGKAGGC AASQCEAIGR LVSLAWRSGV
QARQVVKQLI GITCHKPAGF GENRVTSCAD AVARAILTHM QMETDDDSVI KTVNNGGACP
ECGGPVEHEG GCCVCHACGY SECA
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