Gene Pcar_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1850 
Symbol 
ID3724540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2164201 
End bp2165229 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content59% 
IMG OID637751451 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_357261 
Protein GI77919446 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTGT TGACCCTTGA ATCTTCCTGT GACGAAACTT CGGCGGCTGT CGTACGTGAC 
GGCCGCCAGG TTTTGTCGAA TGTCATTGCA TCGCAGATCG ACGTTCACGC ATTGTATGGC
GGTGTCGTCC CCGAACTGGC TTCGCGCAAA CATATGGAAG CTGTGGCGGT GGTGGTCGAC
GATGCTTTGC GCCAGGCCCG GGTTGCGCTT GGCGATATCG AAGGCATCGC CGTAACGCGC
GGTCCCGGTC TGGTGGGTGC CTTGCTGGTC GGTTTGTCCA TGGCCAAGGC CATGGCCATG
TCGCTGGATA TCCCGCTGGT CGGCGTTCAT CATATGGAAG GGCACATTCT GGCGCCTCTG
TTGGAGCAGG ATGTCCCGTT TCCCTATCTG GCTTTGGCTG TTTCAGGGGG GCATACCCAC
CTTTATCGCG TCGACGGTAT CGGTCGGTAC CGGATTGTCG GCCGGACCCT CGATGACGCC
GCGGGGGAAG CTTTCGACAA GGTCTCCAAG CTTCTGGGGC TCGGTTATCC CGGCGGTGCG
GTCATCGATC GGCTGGCCGC CGAGGGCAAT CCCAAGGCCT TCGATTTTCC ACGGCCGTTG
CTTAAAAAAC CCAACTTTGA TTTCAGTTTC AGCGGAATCA AAACCGCCTT GCTGTATTAT
GCGCAAAGTC AGAAAGGTCC CATCGAAGGG GATCATCTTC GCGATGTTGC GGCCAGTTTT
CAGCAGGCGG TGGTCGAAGT ACTTTGCAAA AAAACCCTGC GGGCGGCCAG GGAAACAGGG
CTGCAACGCA TCGTGGTGGC CGGTGGCGTA GCTTGCAACA AGGGACTGCG TCGCATGATG
GGGGAGCGTT CGGCTAAAGA AGGATTCCAG GTATTTTTCC CCAGCCCGGG CTTATGCGCG
GATAATGCCG CCATGCTCGG TGTTGCCGGA GACGCCTACC TTGCGGGGGG CTGTACCTCC
GATCTGGATC TCAACGCCCG GTCCAATTGG CCCCTCGATC AGGCCGGTTG GCCACAGCCC
TGCCGGTAG
 
Protein sequence
MLLLTLESSC DETSAAVVRD GRQVLSNVIA SQIDVHALYG GVVPELASRK HMEAVAVVVD 
DALRQARVAL GDIEGIAVTR GPGLVGALLV GLSMAKAMAM SLDIPLVGVH HMEGHILAPL
LEQDVPFPYL ALAVSGGHTH LYRVDGIGRY RIVGRTLDDA AGEAFDKVSK LLGLGYPGGA
VIDRLAAEGN PKAFDFPRPL LKKPNFDFSF SGIKTALLYY AQSQKGPIEG DHLRDVAASF
QQAVVEVLCK KTLRAARETG LQRIVVAGGV ACNKGLRRMM GERSAKEGFQ VFFPSPGLCA
DNAAMLGVAG DAYLAGGCTS DLDLNARSNW PLDQAGWPQP CR