Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1850 |
Symbol | |
ID | 3724540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2164201 |
End bp | 2165229 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637751451 |
Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
Protein accession | YP_357261 |
Protein GI | 77919446 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTATTGT TGACCCTTGA ATCTTCCTGT GACGAAACTT CGGCGGCTGT CGTACGTGAC GGCCGCCAGG TTTTGTCGAA TGTCATTGCA TCGCAGATCG ACGTTCACGC ATTGTATGGC GGTGTCGTCC CCGAACTGGC TTCGCGCAAA CATATGGAAG CTGTGGCGGT GGTGGTCGAC GATGCTTTGC GCCAGGCCCG GGTTGCGCTT GGCGATATCG AAGGCATCGC CGTAACGCGC GGTCCCGGTC TGGTGGGTGC CTTGCTGGTC GGTTTGTCCA TGGCCAAGGC CATGGCCATG TCGCTGGATA TCCCGCTGGT CGGCGTTCAT CATATGGAAG GGCACATTCT GGCGCCTCTG TTGGAGCAGG ATGTCCCGTT TCCCTATCTG GCTTTGGCTG TTTCAGGGGG GCATACCCAC CTTTATCGCG TCGACGGTAT CGGTCGGTAC CGGATTGTCG GCCGGACCCT CGATGACGCC GCGGGGGAAG CTTTCGACAA GGTCTCCAAG CTTCTGGGGC TCGGTTATCC CGGCGGTGCG GTCATCGATC GGCTGGCCGC CGAGGGCAAT CCCAAGGCCT TCGATTTTCC ACGGCCGTTG CTTAAAAAAC CCAACTTTGA TTTCAGTTTC AGCGGAATCA AAACCGCCTT GCTGTATTAT GCGCAAAGTC AGAAAGGTCC CATCGAAGGG GATCATCTTC GCGATGTTGC GGCCAGTTTT CAGCAGGCGG TGGTCGAAGT ACTTTGCAAA AAAACCCTGC GGGCGGCCAG GGAAACAGGG CTGCAACGCA TCGTGGTGGC CGGTGGCGTA GCTTGCAACA AGGGACTGCG TCGCATGATG GGGGAGCGTT CGGCTAAAGA AGGATTCCAG GTATTTTTCC CCAGCCCGGG CTTATGCGCG GATAATGCCG CCATGCTCGG TGTTGCCGGA GACGCCTACC TTGCGGGGGG CTGTACCTCC GATCTGGATC TCAACGCCCG GTCCAATTGG CCCCTCGATC AGGCCGGTTG GCCACAGCCC TGCCGGTAG
|
Protein sequence | MLLLTLESSC DETSAAVVRD GRQVLSNVIA SQIDVHALYG GVVPELASRK HMEAVAVVVD DALRQARVAL GDIEGIAVTR GPGLVGALLV GLSMAKAMAM SLDIPLVGVH HMEGHILAPL LEQDVPFPYL ALAVSGGHTH LYRVDGIGRY RIVGRTLDDA AGEAFDKVSK LLGLGYPGGA VIDRLAAEGN PKAFDFPRPL LKKPNFDFSF SGIKTALLYY AQSQKGPIEG DHLRDVAASF QQAVVEVLCK KTLRAARETG LQRIVVAGGV ACNKGLRRMM GERSAKEGFQ VFFPSPGLCA DNAAMLGVAG DAYLAGGCTS DLDLNARSNW PLDQAGWPQP CR
|
| |