| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1844 |
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| Symbol | hndC-1 |
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| ID | 3724534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2159568 |
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| End bp | 2161028 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637751445 |
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| Product | NADP-reducing hydrogenase chain C |
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| Protein accession | YP_357255 |
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| Protein GI | 77919440 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTC AGCTTAGAAT AGCCACCCGC AACAGCGGGT TTATCGATCC GGAATCCGTC
GAGTCCTACA TTGCCGTCGG CGGCTACCAG GCTCTGGGCA AATGCCTGTC CGAAATGAAG
CCTGCCGACG TTATCGAACT GATGAAAAAC AGCGGTCTGC GCGGCCGTGG CGGCGCAGGT
TTCCCCACCG GCGTAAAATG GGGTTTTGCC GCCAAGTACG ATTCCGACAT CAAGCATGTC
GTATGTAACG CCGATGAAGG CGACCCGGGG GCATTCATGG ACCGCGCGGT TCTCGAAGGC
GACCCGCACA GCGTTCTGGA AGCTATGGCC ATCGGCGCCT ACGCCATCGG CGGCAACAAA
GGCACCATCT ACATCCGTGC CGAGTACCCG CTGGCCATTG CCCGCCTGAA AATGGCCATC
GAGCAGGCCA AGGAAATGGG CGTGCTGGGC GACAACATCA TGGGCACCGA CTTCTGTTTC
GACCTCGAGT TGAAATACGG CGCCGGCGCG TTTGTCTGCG GCGAGGAAAC CGCCCTGATC
AACTCCATGG AAGGTAACCG CGGCGAGCCT TACACCAAGC CTCCTTTCCC TGCCGAAGCC
GGTTACTGGA ACAAGCCGAC CATCGTGAAC AACGTCGAGA CCCTGGCCAA CATCCCGGCC
ATCATCATGA AGGGCGCCGA CTGGTTCAAC AAGATCGGTA CCGAAACTTC CAAGGGCACC
AAGGTTTTCT GTATCTGCGG TAAGATCGCC AATGTCGGTC TGATCGAGGT TCCCATGGGA
ACCACCCTCA AAGAAGTTAT CTACGATATC GGCGGCGGCA TCCCCGGCGG CAAGGAATTC
AAAGCCGTTC AGACCGGCGG TCCCTCCGGC GGTGCTTTGA CCTACAAGGA TCTGGACGCT
CCTATCGACT ACGAAAACCT CGTGGCACGC CAGTCGATGA TGGGTTCCGG CGGCATGATC
GTCATGGACG AAGAGGACTG CATGGTGTCG GTTGCCAAGT TCTTCCTCGA CTTCACCATG
GACGAGACCT GCGGCAAATG TACGCCCTGC CGTATCGGCT CCAAGCGTAT CTACGAACTG
CTTGATAAAA TCACCATCGG TCAGGGTACC GAAGCAGATC TGGAAAAACT GCGCAGCCTG
TCGGTGAACA TCAAGGACAC CGCTCTGTGC GGCCTGGGCC AGACCATGCC TAACCCGGTA
TTGTCGACCA TGCGCGTCTT CGAAGACGAG TACCGCGCGC ACGTTATCGA CAAGAAATGT
CCTGCCGGCG TTTGCGCCGA ACTGCTCGAA TACACTGTTG TGGACCAGAA GTGCGTTGGC
TGTACCCTGT GCGCCAAAGT CTGCCCGGTT AACTGCATCA GCGGTAAGCC GAAGGAAGTC
CATGTCATCG ACCAGGCTGC ATGTATCAAG TGCGGCGCAT GTCTGGACAA GTGTAAGTTC
GACGCCATCA TCAAACAGTA A
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| Protein sequence | MATQLRIATR NSGFIDPESV ESYIAVGGYQ ALGKCLSEMK PADVIELMKN SGLRGRGGAG
FPTGVKWGFA AKYDSDIKHV VCNADEGDPG AFMDRAVLEG DPHSVLEAMA IGAYAIGGNK
GTIYIRAEYP LAIARLKMAI EQAKEMGVLG DNIMGTDFCF DLELKYGAGA FVCGEETALI
NSMEGNRGEP YTKPPFPAEA GYWNKPTIVN NVETLANIPA IIMKGADWFN KIGTETSKGT
KVFCICGKIA NVGLIEVPMG TTLKEVIYDI GGGIPGGKEF KAVQTGGPSG GALTYKDLDA
PIDYENLVAR QSMMGSGGMI VMDEEDCMVS VAKFFLDFTM DETCGKCTPC RIGSKRIYEL
LDKITIGQGT EADLEKLRSL SVNIKDTALC GLGQTMPNPV LSTMRVFEDE YRAHVIDKKC
PAGVCAELLE YTVVDQKCVG CTLCAKVCPV NCISGKPKEV HVIDQAACIK CGACLDKCKF
DAIIKQ
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