Gene Pcar_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1826 
Symbol 
ID3724516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp2136449 
End bp2137147 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content59% 
IMG OID637751428 
Producthypothetical protein 
Protein accessionYP_357237 
Protein GI77919422 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0000356216 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCG TATCGGTTCT GAAACGTTTT TTACGGAAAA AACTGCGTCG CTATTTTTTC 
GCCGGCCTGC TGGTGCTGGT GCCGGTAGGA CTGACCATCG TCGTGGTGCG ATGGATTGTC 
AGCCTGATGG ACGGCTTGCT GGTGCGCATG CTGCCGCTGC GCTGGCAACC CGAGCAGCTG 
TTCGGATTTG CGGTGCCCGG CCTCGGCGTG GTATTGACTT TCCTGCTGAT TATTTTTACC 
GGCGTGCTGG CTACCAACTA TTTCGGGCAC AAGCTGGTGC GTGCTTCCGA AAAACTGGTC 
TACCGCATTC CCCTGGTCAA GGGGATCTAT ACCCTGTTCA AGCAGGTGGC CGACACGGTT 
CTCAGCAGCG ATCGCCAGGG ATTTCGCAAG GTTGTTCTCA TCGAATACCC GCGCAAGGGC 
CTCTGGTCCA TCGGCTTCGT TACCGGTGTC AGCGAGGGTG AGCTGCAGCG CATCACGGCG 
CGGCGGGTGA TCAACGTTTT TATACCGACC ACCCCCAATC CGACCTCGGG CTATTACATC 
CTGGTGCCGG AGGAAGACAC CTGCGTACTC GGGATGACGG TGGAAGAAGC TTTCAAGCTG 
ATCGTCTCCG GCGGCATGGT GTCGCCGCCC GATCGCTATA AGGGCGTTCC CGTCGCAGGC 
GCTGCGGCCA GCAGCTTCCC GTCAGAGGAT GGTCGGTAA
 
Protein sequence
MARVSVLKRF LRKKLRRYFF AGLLVLVPVG LTIVVVRWIV SLMDGLLVRM LPLRWQPEQL 
FGFAVPGLGV VLTFLLIIFT GVLATNYFGH KLVRASEKLV YRIPLVKGIY TLFKQVADTV 
LSSDRQGFRK VVLIEYPRKG LWSIGFVTGV SEGELQRITA RRVINVFIPT TPNPTSGYYI 
LVPEEDTCVL GMTVEEAFKL IVSGGMVSPP DRYKGVPVAG AAASSFPSED GR