Gene Pcar_1824 details

Gene Information

• Locus tag: Pcar_1824
• Symbol: smpB
• ID: 3724514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2135488
• End bp: 2135940
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637751426
• Product: SsrA-binding protein
• Protein accession: YP_357235
• Protein GI: 77919420
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00000000470623
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTATTA AAATCATTGC AAATAACAAA AAAGCCTACC ACGACTATTT CATAGACGAG 
GTTCTGGAAG CCGGCATGGT GCTGCTCGGT ACCGAGGTTA AATCGCTGCG CCTGGGCAAG 
GCCAATCTTA AGGATGCCTT CTGTCGCATC ATGGGCGGAG AGTTGTACGT CAACAATCTG 
CATATCAGCC CCTACGAATT CGGCAACCGC GAAAATGCGG ATCCGACCCG TGCCCGCAAG 
CTGTTGGTGC ATCGCGCCGA ACTCGACAAA CTGGCGCGTA AAGTCGATGA AAAGGGACTT 
TCCCTGGTGC CGACCAAGCT CTATTTCAAG GAAGGGCGGG TCAAGATCGA AATTGGTATC 
GCCCGCGGTA AAAAACTGCA TGATAAACGC CAAACCCTTA AGAGCAAAGA GGCCGATCGC 
GAAATGGCCC GCGCCCTGCG CGACCGGCAT TAA 

 

Protein sequence

MGIKIIANNK KAYHDYFIDE VLEAGMVLLG TEVKSLRLGK ANLKDAFCRI MGGELYVNNL 
HISPYEFGNR ENADPTRARK LLVHRAELDK LARKVDEKGL SLVPTKLYFK EGRVKIEIGI 
ARGKKLHDKR QTLKSKEADR EMARALRDRH