| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1823 |
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| Symbol | intB |
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| ID | 3724512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2133571 |
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| End bp | 2134836 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751425 |
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| Product | prophage P4 integrase |
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| Protein accession | YP_357234 |
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| Protein GI | 77919419 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0003918 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAA GCATTAAACC GTTATCCGCT ACGAAAGTGA AGAAAGCGAA GCCAGCCGAA
AAGCAGTACA CCCTTTTTGA TGGTCAAGGG CTGTTTCTGC TGGTGACACC AACTGGTAGT
AAGCTGTGGC GCTTCAAGTA TCGTTTGAAT GGTAAGCCGA AGCTGATGTC TTTCGGGGCA
TATCCCGAGG TCAGTCTGGA GCAGGCCAGG GAAAAGCGCA CCGCAGCAAG GAAGCAGGTT
GCCAACGGTA TTGATCCTTG TGTGGTGCGG AGGGCTGTTA AAGAATCGCA GGCTGCCGGT
GAAGGTAGTT TTGAGGTTGT AGCCAGGGAA TGGCACCAGA AATTTTCGTC AACATGGTCT
GAATCTCACG CCAAAACCCA ACTTGGACGA ATGGAGCGTG ACCTGTTCCC ATGGTTGGGA
GATCGTCCAA TTGTCGAAAT AACCTCACCT GAGTTGTTGG CCGTATTGCG CCGGATCGAG
TCACGCGGAG CTTTGGAAAC AGCCCACAGG GTAAAAACTA TCTGCGGTCA GATATTCCGT
TATGCAATAG CAACGGGTAG GGCAGAGCGC GATCCTGCCG CAGACCTCAA AGGAGCTTTG
CCTCCAGTGC AGGCGACCCA TCATGCCGCC ATGACGAAAC CTGGCGATCT GGCCGACCTG
CTTCGTACAA TTGACGCTTA TGAAGGGTCA CACGTGGTCC GCTGTGCTTT GCGTTTCGCC
CCTCTGGTAT TTGTCCGGCC AGGGGAATTG AGACAGGCTG AATGGTCTGA GTTCGACCTT
GATGCAGGGG AGTGGAACAT ACCTGTTGAG CGCATGAAGC TGCCGAAAAA AACCAAAATA
CGACGTGCCG GTGAAGCGCA CCTTGTCCCG TTGTCGAAAC AGGCTGTGGA GATCCTGCGG
GATCTGCAAC CTCTGACCGG GGATGGTCTA TACGTGTTCC CATCGGTGCG ATCTGCTGGC
AGGCCGATGA GCGACAACAC CATAAATGCC GCCTTGCGTC GTCTTGGATA TTCAAAAGAC
GAAGCAACAG GTCACGGTTT TCGAGCCACT GCGCGAACGA TCCTTGATGA AGTGCTACAG
GTTCGCCCCG ATCTGATCGA GCACCAGCTG GCGCACAGTG TACGTGATCC TCTCGGGAGG
GCATACAACC GCACAAGTTT TCTACCCGAG CGCCGGGAAA TGATGCAGCT ATGGGCCGAC
TACCTCGACG GCCTGAAAGC AGGTGCCAAG GTGATACCGA TTTCAAAGCG CACTGCATCC
AAATAA
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| Protein sequence | MAKSIKPLSA TKVKKAKPAE KQYTLFDGQG LFLLVTPTGS KLWRFKYRLN GKPKLMSFGA
YPEVSLEQAR EKRTAARKQV ANGIDPCVVR RAVKESQAAG EGSFEVVARE WHQKFSSTWS
ESHAKTQLGR MERDLFPWLG DRPIVEITSP ELLAVLRRIE SRGALETAHR VKTICGQIFR
YAIATGRAER DPAADLKGAL PPVQATHHAA MTKPGDLADL LRTIDAYEGS HVVRCALRFA
PLVFVRPGEL RQAEWSEFDL DAGEWNIPVE RMKLPKKTKI RRAGEAHLVP LSKQAVEILR
DLQPLTGDGL YVFPSVRSAG RPMSDNTINA ALRRLGYSKD EATGHGFRAT ARTILDEVLQ
VRPDLIEHQL AHSVRDPLGR AYNRTSFLPE RREMMQLWAD YLDGLKAGAK VIPISKRTAS
K
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