| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1800 |
|---|
| Symbol | |
|---|
| ID | 3724489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2102553 |
|---|
| End bp | 2103761 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637751402 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_357211 |
|---|
| Protein GI | 77919396 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TCATGAATAT ATGTAGTTGG CTTGGACCTC CCTATGATGG CGGCAATATT
AATCGTTATG AAATATTGAA AAGGCTTTCG AAAAATCATG ATTTAAGATT TTTCTTTCCC
AGAGATGTTA CCGATTCTAG ACCTATGGAT GGTAGGCAAT TATTAAGTTT GGGTGTATGT
AATTCTGGTG TAAAAGTTCT CGACTTACCA AAGCTCTCAA AATTTGACTA TTTAAAAGGA
TTTTTATTTA GTAAATATCC AGCTGGCATT TATGCCCGTA ATAAAGCATA TTTTGAAATT
TTCAAAGAAG CTTTAAGTGA TTATTGTCAA CAATGGAAAC CTGATGTAAT TATTGTTTGG
AATCCAGCTC TGGCTCTAAT ACTCAAGGAT ATTTGCCCTT TTGTTCGAAG GAGAATTTTG
TATGCTTGCG ATTGCATGAG TCTTGTCCTC GAAACTCTTG CTGAAAATCA TCACAGTCAT
CTGAAAAAGC TTTATTATAG GAATAGTGTA AAGGGTAGTG AGTTTATCGA TCGAACTGTT
TATCCCTATT ATGATGATGT TATATTTATA AGTGAAAGAG ATGCAAGCTA TTCAAAATTT
AATGGGAAAT ATAAAATTCT TTGTAATGGT GTGGATGTTA AAAAATTTAA GCCTTTACCG
AGTTTTAAAT CTAAAATACC CACTCTAGGT TTCCATGGTA ATTTATCGTA TGAGGCGAAT
AGAGATGCTG TTCATTATTT AAATAATTAC ATAGCCCCCA GAATTCAAGA GTATTTCCCG
AATATCTTGA TAAAAATTAT AGGCGGACCA TCAAGCTCTG TTGATTCCTT GAAAAAACAT
TGTTTAAATT CCTCGATTCA ATTTACGGGT TATGTTGATA GCTTAGAAGA AGAGCTTAAT
AATCTTTGGG TTTATCTTGC GCCTCTTATG ATAGGGGGGG GAGTTAAGAA TAAAGTTTTG
GAAGCCTTAT CATGTGGTCT TCCTGTTTTA GGTACTCAGG AAAGTTTCAA TGGCTTATCG
CTTGGTAGCA TGGATGCTAT AGTCTCTGAT TATGATCCTG ATATTTTTGT TCGAAAATTG
GTTTCTCTTA TTGAAAAACC ACAATATGCT ATAGAAGTTG GGAATAATGC TAGAAAATGG
GCTGTTGAAA ATGCTAGCTG GGAATCAGTC TGTTCTAAAT TTGATTCTAT TATCAATCAA
GAAGCTTGA
|
|---|
| Protein sequence | MKKIMNICSW LGPPYDGGNI NRYEILKRLS KNHDLRFFFP RDVTDSRPMD GRQLLSLGVC
NSGVKVLDLP KLSKFDYLKG FLFSKYPAGI YARNKAYFEI FKEALSDYCQ QWKPDVIIVW
NPALALILKD ICPFVRRRIL YACDCMSLVL ETLAENHHSH LKKLYYRNSV KGSEFIDRTV
YPYYDDVIFI SERDASYSKF NGKYKILCNG VDVKKFKPLP SFKSKIPTLG FHGNLSYEAN
RDAVHYLNNY IAPRIQEYFP NILIKIIGGP SSSVDSLKKH CLNSSIQFTG YVDSLEEELN
NLWVYLAPLM IGGGVKNKVL EALSCGLPVL GTQESFNGLS LGSMDAIVSD YDPDIFVRKL
VSLIEKPQYA IEVGNNARKW AVENASWESV CSKFDSIINQ EA
|
|---|
| |