Gene Pcar_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1796 
Symbol 
ID3724485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2098515 
End bp2099264 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content34% 
IMG OID637751398 
Productglycosyltransferase 
Protein accessionYP_357207 
Protein GI77919392 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones91 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAG TTTCTATAAT TACACCCTGT CATAATTCTG CCCCTTTTGT TTTGGAAACA 
ATTAAATCTA TATCTGAACA GACCTTTACT AACTGGGAGC ACATTTTAGT TGATGATGCC
TCAACTGATG ATACTTGGCA AATTATTCAG AAATACTGTT CAAGTGAACC TAGAGCTAAG
TGTTTTAGGC TTACTAAAAA CTCTGGTGCC GCATTAGCAC GAAACATGGC TATTGAGGCA
GCTCAAGGTC GATATATTGC ATTTATTGAT TCTGACGATC TATGGATGCC AGAAAAACTA
GAAAAACAAA TCGAGTTTAT GCGTTACAAA AATGCATATT TATCTTTTTC TAGTTATGAA
AAAATAAATG AATACGGAGT TCGGTCAGGG CGGATGGTGG ATGTACCTAA TGAAGTTAAT
TATAATGAAA TTTTAAAAGG GTGTGTAATA GGGTGTCTTA CTGCTATGTA TGACAGTAAA
TATCTTGGCA AGGTGTATAT GCCTGATATA CGACGAGGCC AAGATTATGG ACTTTGGCTT
CGTATTCTTA GGCGAGGACA TATCGCATAT GGATTAAATT GTCCTCTTGC TTTATATCGG
GAAAGATCTG GCTCTATCTC TTCCTCTAAA TTTAAAAAAG CATATTCTCA ATGGCGTATT
TACAGAAATA TTGAAAAGCT ATCTTTAATC TGTAGTCTAA AGAACTTTTT CTTTTATTCT
TATAAAGGAT TCAAAAAGAA AATCATTTGA
 
Protein sequence
MDKVSIITPC HNSAPFVLET IKSISEQTFT NWEHILVDDA STDDTWQIIQ KYCSSEPRAK 
CFRLTKNSGA ALARNMAIEA AQGRYIAFID SDDLWMPEKL EKQIEFMRYK NAYLSFSSYE
KINEYGVRSG RMVDVPNEVN YNEILKGCVI GCLTAMYDSK YLGKVYMPDI RRGQDYGLWL
RILRRGHIAY GLNCPLALYR ERSGSISSSK FKKAYSQWRI YRNIEKLSLI CSLKNFFFYS
YKGFKKKII