| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1751 |
|---|
| Symbol | |
|---|
| ID | 3724440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2048257 |
|---|
| End bp | 2049435 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637751355 |
|---|
| Product | Flp pilus assembly ATPase CpaE |
|---|
| Protein accession | YP_357164 |
|---|
| Protein GI | 77919349 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 72 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGTA AACTACTCGT AGCCATTGAA ATAGCGGACA GTCGCCTGGT CCACACGCTC
CAGGAAAAAC TCAAGGAAAT ACCCAACCTG GAGATCGCGC AGTGGTTCGA TTCGGCTGCC
GAGAAAGGTT CCCTCGCCGT TAAGGGATTG CCGGATATCA TCCTGCTCGA CGACACCACC
GATGGCACAT CCATATTCAA CCGCCTCCAA CTTATTCGAC AGAACTTTCC GCATGCTGCA
GTTTTCGTTA CATCGACCAA CCAGTTTCCG CAACATATCG TTGAAGTCAT GAAAGCCGGA
GTATCGGAAT ACCTGGTAAC GCCAATCAAC GATAAAGTCC TTAAAAACGC CGTGGAGGAT
GTTCGACTTA AACTTGCCTC CATGGGCCAG GTGTCGCGGG GATCGATCTA CAGTTTTATC
AGCAGCAAAG GCGGTCTTGG TTCGACCGTT CTAGCCGTCA ATACCGCTTG CGCCCTGGCC
AAACACAAGG AATCGCGCAT TGCCCTTTTC GACATGAGCA TTCAGTCGGG CGACGCAACT
GTTCTGCTCG ATCTCTACCC CCAGACCACC ATGAGCGATA TCGTCCGCAA TTACCATCGA
CTCGACAGTT CCTTTTTGTT GGCCGCCATG ACCAAGCATG CCTCGGGTCT GGAATTTATG
GCGGCCCCGA ATAACCCCGA AGATTACGAT CTCATCAAAA CGGAACATGT CTCACAGGTA
CTGGATCTTG CCCGCAAGAT TTATGACCAG GTGGTCGTCG ATTGCACCTC CATGTCGATC
AACGACAGTA ATATCGAAAT ATTCAAGATG TCCGAGGTTG TTTTCCTTGT CACCGACATG
TCGGTTCCTG CAATCCGTAA CTGTGCCCGT TTGATCAAAC TTTTGCAAAA ACTCGGTATC
GACGACAATC ATATCGAGGT TGTCGTAAAT CGCTTCATCA AGGGCGGTTC CTTGAGCCTT
AGTGATGTCG AAAAAAATCT TGGCAAAAAG GTTTTCTGGC TTTTCCCCAA TGATTTCAAG
GGAGTCGTTG CTTCCATCAA TAAGGGGGAG CCGCTTATGT CTGGCCACTC AGGCACTCCC
CTGGCAAAAA ATGTCGGCCA GTTTGTCGAA AAGGTTAAAT CACCCGAAGG CAAACACACC
TTTCGAGGAA TACGCGGAGC CTTCGGAAAG GCTATTTAA
|
|---|
| Protein sequence | MPRKLLVAIE IADSRLVHTL QEKLKEIPNL EIAQWFDSAA EKGSLAVKGL PDIILLDDTT
DGTSIFNRLQ LIRQNFPHAA VFVTSTNQFP QHIVEVMKAG VSEYLVTPIN DKVLKNAVED
VRLKLASMGQ VSRGSIYSFI SSKGGLGSTV LAVNTACALA KHKESRIALF DMSIQSGDAT
VLLDLYPQTT MSDIVRNYHR LDSSFLLAAM TKHASGLEFM AAPNNPEDYD LIKTEHVSQV
LDLARKIYDQ VVVDCTSMSI NDSNIEIFKM SEVVFLVTDM SVPAIRNCAR LIKLLQKLGI
DDNHIEVVVN RFIKGGSLSL SDVEKNLGKK VFWLFPNDFK GVVASINKGE PLMSGHSGTP
LAKNVGQFVE KVKSPEGKHT FRGIRGAFGK AI
|
|---|
| |