| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1747 |
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| Symbol | |
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| ID | 3724436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2044555 |
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| End bp | 2046078 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637751351 |
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| Product | Flp pilus assembly protein CpaC |
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| Protein accession | YP_357160 |
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| Protein GI | 77919345 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 65 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAC GCCGAGCCAT TCTTCCGGCA ATCTGCTTCT TAGGCCTGTT TTGCCTGGCT
CTGTTCACCG GGACGGCCGC TGCCGACGAT ATCGAGCATC TGACTCTCGA TGTCAATATC
GGCGGCTCGG AACTGGTCGA AATACGCGAA CCGAGCCAGC GGATGAAAAT CCTCATCTCC
AACGGCGACA TCATAGGCGC CAGACCGTTG CGCCCAAATT TGATCAACGT CTATAACCTG
GGCAAAAAGA TAGGCTTTTC CCGGGTTACC GTTTGGGACG ATGCCGCTCG CCAGGTACGC
GCAATCATCG ACGTAAGCGT CAACCTCGAC CTGACACCTC TCAAACAAAA GATCGGCGAG
CTCTACCCAC ATGAGAATAT CAAGGTTTAT GCCTCGGAAA CCGGCGTGGT CCTCTCAGGC
ACCGTCTCCA GCCCGGAGGT GGTCGAGCAG GTCATTCGCC TGACGGAAAC CTTTTTACCC
AAAAAGGCTG AGGCTTCAAC GAGCGGTAAA GGCACCGGCA AATCGGGCAG CGGCATCACC
AACCTGTTGA GCGTCGGCGG TGTCCAGCAG GTCATGCTCG AAGTCAAATT CGCCGAAGTC
ACCCGCTCCT CCGGTCGTGA CTGGCAAGCG GCCCTTGGAT TCAACGGCCT GGGTGATAAT
TCCGGTCTTG TCGCTGGTGT AGGCGGCATT TCCGGCGATA TTTCCGGTGG CGATTTTACA
GGCAAACTCG GCAGCGTATT GCTGAACTTC GCTGACTTTG CCAGCAACCC AGCAAACATC
TTTGTACAAA TGGGCGATTT CACCTCGGCC CTACGCTTCC TTGAGGATGA AGGCCTTGCA
CGTATCCTCG CCGAACCGAG ATTGGTCACC ATGAGCGGTC AGGAGGCCAG TTTCCTGGCC
GGTGGAGAAT TCCCGATCCC GGTACCGGAT GAAGACGGCA TCACCATTGA ATTTCGTGAA
TTCGGGGTCT CCCTGCGATT TACCCCCGTA GTAATGAGCG ATGGGAAGAT CAGTTTACGC
GTGGCTCCAA GCGTCAGCGA CATTGCCTCA ACCAGTTCCA TACCGTCAAG CATTACGGGA
ACCACCTATA ATGTGCCCAA CCTGACAACC CGCAAACTCG AAACCACCGT ACAACTATAT
GACGGACAGA CCTTGGCATT GGCTGGATTA CTGCAGGATA CTCTGCGTGA AAGTGTATCC
AAAATACCCG GCCTGGGTGA TCTTCCGATC CTCGGTGCCC TGTTCCGCAG CACCAGCTAT
ACCCAGGAGA AAACCGACCT GCTGATTGCT GTAACACCAC ACCTGGTCAA ACCGAGCAAG
GAAGGCACTC TCAGCTTCCC CGGCGAATAC ATGCGTCCCC CCAACCGGCT TGAGTTTTAT
CTCGAAGGCC GCCTTGAAGG TCGCAGATTC CCGAATGATC CCTCGGCTTT GAGCCAGCAT
AGTTTTGCCG CACCGCCTCA AATGAACGAA ACGGCTGGTG GACTCGAAGG TGAGTTCGGC
CATGAACCCG TGACGGCACA ATAA
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| Protein sequence | MTTRRAILPA ICFLGLFCLA LFTGTAAADD IEHLTLDVNI GGSELVEIRE PSQRMKILIS
NGDIIGARPL RPNLINVYNL GKKIGFSRVT VWDDAARQVR AIIDVSVNLD LTPLKQKIGE
LYPHENIKVY ASETGVVLSG TVSSPEVVEQ VIRLTETFLP KKAEASTSGK GTGKSGSGIT
NLLSVGGVQQ VMLEVKFAEV TRSSGRDWQA ALGFNGLGDN SGLVAGVGGI SGDISGGDFT
GKLGSVLLNF ADFASNPANI FVQMGDFTSA LRFLEDEGLA RILAEPRLVT MSGQEASFLA
GGEFPIPVPD EDGITIEFRE FGVSLRFTPV VMSDGKISLR VAPSVSDIAS TSSIPSSITG
TTYNVPNLTT RKLETTVQLY DGQTLALAGL LQDTLRESVS KIPGLGDLPI LGALFRSTSY
TQEKTDLLIA VTPHLVKPSK EGTLSFPGEY MRPPNRLEFY LEGRLEGRRF PNDPSALSQH
SFAAPPQMNE TAGGLEGEFG HEPVTAQ
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