Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1746 |
Symbol | |
ID | 3725947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2043709 |
End bp | 2044527 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637751350 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_357159 |
Protein GI | 77919344 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 71 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT ATGGCACCAT CATCGCCCTG GCACTGGCCG TCATTTTCGG GGTCATTGCG GTTATTCTGG TCAACAGATG GCTTTCCTCC AAGGTATCAC AGGAAGCCAC AACACCCAGA GAGTCCATCG CCATGACCGA GATCGTCGTA GCGGCGGCTG ACGTCAACAT CGGCACCCGA CTCGATCAAA CACTGCTGGC CATGGCCCAA TGGCCCAAGG CCAGCGTCCC AAAGGGAGCC TTTGAAGATA TCGAGCAGGT TGTGGGGCGC GTTTCCGTGA GTAAGATGGT TACGGGTACC CCCATCCTGG CGGCGGAACT TGCCGCACCC AATTCCGGAG CCGGACTCGT TGCCCTTATC AAGCCCGGCA TGCGGGCCAT GGCCATTAAA GTCAACGAAG TCGTCGGTGT CGGCGGATTC ATTCTACCGA ATACTTTTGT CGATATTATT TCTCTGGACG AAAGATCGAA ACGTACCAAA GTAGCCGATA CATTCCTGCA CAAGGTCGAA GTTCTCGCCA TCGCCCAGGA AACCTTCATC GAGGAAGGCA AGCCTAAAGT GGTTCGCACC GTAACTCTTG AATTAACACC TGAAGATGCC GAAAAGCTGG TGGAAAAAAC CCATGAAGGC CCCATCCAAC TTGTCCTGCG CAACCCTCTG GACGAAAAAG AAACTCCTCC GCCACCTAAA AAGGTGGTAA AAAGAACACG TGTTCGTAGA GCAAAACCAA GGGTTTACAC GCCACCGGCA CCAACTTTCG AAGTTGAGGT CATACGCGGC GAAAGACCGG CGGAAAACTA TCAGTTCAAA GCTAAATAA
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Protein sequence | MKKYGTIIAL ALAVIFGVIA VILVNRWLSS KVSQEATTPR ESIAMTEIVV AAADVNIGTR LDQTLLAMAQ WPKASVPKGA FEDIEQVVGR VSVSKMVTGT PILAAELAAP NSGAGLVALI KPGMRAMAIK VNEVVGVGGF ILPNTFVDII SLDERSKRTK VADTFLHKVE VLAIAQETFI EEGKPKVVRT VTLELTPEDA EKLVEKTHEG PIQLVLRNPL DEKETPPPPK KVVKRTRVRR AKPRVYTPPA PTFEVEVIRG ERPAENYQFK AK
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