Gene Pcar_1739 details

Gene Information

• Locus tag: Pcar_1739
• Symbol: lexA
• ID: 3725940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 2034960
• End bp: 2035568
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637751343
• Product: LexA repressor
• Protein accession: YP_357152
• Protein GI: 77919337
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases)
• TIGRFAM ID: [TIGR00498] SOS regulatory protein LexA

Plasmid Coverage information

• Num covering plasmid clones: 92
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCCCC TTACTCCCAA ACAAAAACAG GTTTTCGATT ACATCGCCCG GCATATCGGC 
GAGCAGGGGT TCGCTCCTTC CCAGCAGGAA ATCGCGCGGG CATTCGGGTT CCGTTCCCTG 
GGCACGGTAC GGAACTATCT GGTGCGCCTG GAACGCGAAG GACTGCTGGA ACGCAACTGG 
AACGCCCGCC GCGGATTGCA GCTACGCACA GCTTCGGAAC GCGGCATGAA GCTCCCCCTG 
GCCGGAACGG TTGCAGCCGG CAAACCTATC GAGGCGATCG AAATACCCGA TGTCATTGAA 
GTACCGCCAA CCATGGTCGG TTCCGGCGAG CATTTCGTAT TGCGCGTGGC CGGCGATTCC 
ATGATCGGCG ACGGCATCAT TGACGGCGAC TACGTGGTGG TGCGCAAACA AGCCACAGCC 
GAGCACGGCC AGACCGTCGT CGCCCTGCTT GACAACGAGG CAACGGTCAA GCGCCTGCAT 
CGGCGCAATG ACCGGATCGA ACTGCACCCG GCAAATCCCT CCATGCAACC CATCGTCGTC 
ACCGATCCGG ATAACTTCCG CATCGAAGGG GTGGTGGTCG GTGTGATCCG GCATTACCGA 
TCGGCATAA 

 

Protein sequence

MSPLTPKQKQ VFDYIARHIG EQGFAPSQQE IARAFGFRSL GTVRNYLVRL EREGLLERNW 
NARRGLQLRT ASERGMKLPL AGTVAAGKPI EAIEIPDVIE VPPTMVGSGE HFVLRVAGDS 
MIGDGIIDGD YVVVRKQATA EHGQTVVALL DNEATVKRLH RRNDRIELHP ANPSMQPIVV 
TDPDNFRIEG VVVGVIRHYR SA