Gene Pcar_1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1732 
SymbolmetF 
ID3725933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp2026001 
End bp2026906 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content58% 
IMG OID637751336 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_357145 
Protein GI77919330 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.000245457 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATTC AAGATATTTT CGACCGCTAC GAAACGACCT TTTCTTTCGA ATTCTTCCCC 
CCGAAAACCG ACAAAGCGGC TGAGCGTCTC TACGAAACCA TTCGCCAGCT TGAATCGCTG 
CATCCGCATT TCACCTCGGT TACCTACGGA GCCGGCGGTT CGACCCGTGA ACGCACCCAT 
GATCTGGTCA TGCGTATTCA CGAAAGCAGC TCCCTCGACC CTATCCCGCA CCTGACCTGT 
GTCTCCAGCC CCGAGCAGGA GATTCATCAG ATTCTGAAGC GCTACGCCGA AGCCGGTATC 
AGCAATATCC TGGCACTGGC CGGCGATCCA CCGCCCGACA TGCCGCATTA CGACCGCTCG 
CAGGACGCTT TTCCCCACGC TGCCGATCTG GTACGCTTTA TCCGCAAATT CAACGACGAG 
GGGCTGCATC CCGACAAGCG CGGTTTCGGC ATCGGTGTGG CCGGTTTTCC CGAGGGACAT 
CCGACCACCC CCAATCGCCT GCTGGAGATG GATTACCTTA AAGCCAAGGT CGACGAAGGG 
GCCGACTATA TCTGCACCCA GCTGTTTTTC GACAACCGCG ACTTCTACGA TTTTCGCGAA 
CGCTGCGAAC TGGCCGGTAT CAGCATCCCT ATCATCGCCG GCATCATGCC CATCGCCTCA 
GTTGAAGGCA TGAAACGCAT GGCGGAGCTG GCAGCCGGGG CACGCTTTCC CGCCCCGTTG 
CTGCGCGCTG TGGACCGCTG CCAAGACGAT CCCGAATCGG TACGCCGCAT CGGCATCCAC 
TGGGCCACGG AACAATGCCG CGATCTGCTC GACAACGAGG TACGCGGCAT CCACTTCTAC 
ACCCTCAACA ATTCCGACGC CACCCGCCAG ATCTTTCAAT GTCTTGGGCT GCAGAACCAT 
AAATAG
 
Protein sequence
MHIQDIFDRY ETTFSFEFFP PKTDKAAERL YETIRQLESL HPHFTSVTYG AGGSTRERTH 
DLVMRIHESS SLDPIPHLTC VSSPEQEIHQ ILKRYAEAGI SNILALAGDP PPDMPHYDRS 
QDAFPHAADL VRFIRKFNDE GLHPDKRGFG IGVAGFPEGH PTTPNRLLEM DYLKAKVDEG 
ADYICTQLFF DNRDFYDFRE RCELAGISIP IIAGIMPIAS VEGMKRMAEL AAGARFPAPL 
LRAVDRCQDD PESVRRIGIH WATEQCRDLL DNEVRGIHFY TLNNSDATRQ IFQCLGLQNH 
K