Gene Pcar_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1725 
Symbol 
ID3724434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2018505 
End bp2019767 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content55% 
IMG OID637751329 
Producttwo component sensor histidine kinase 
Protein accessionYP_357138 
Protein GI77919323 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00000120171 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTA AGTCGAAACT GTCGCAGCGC ATCATCCTTT CCGTCGTCCT GCTAACCACC 
ATCGTGAGCG GCCTGTTCGC TATCGGCCTG ACGGCCACGA TTCACTATGT CGAAAAAAGT
CTCGTCGCAA GCGAATTGCA GAAGGATTTT GCCCGGGTAT TCGCAGATTA CCGGAATGGC
CTGGACTTGC GGCTGGATGA AGGGTCGGCA TTTTTTCCGG CGGGGCCGAC GCTGCCCGAC
TATCTGCGTT CCATTCCGAC GGGCTACACG GAAGTTGTTC TGGGCGACCG TCATCGCGCT
TATTACGTTT ATCACCTCGT CGAGGGCAAA ACTTCATACT TTCTGGTCAA AGACCAGACT
TCTTTCGAAA AGGCGGAAAT CCTCCTGCAA AGAGCGGTCC TGGGTGGGTT CGTCTTCTGT
GTCCTGATTT CTTTTGTACT CGGTGTGTTT ATGGTCAAGC AGGTCATCGC TCCGGTACGA
AAACTGACGC GTCAGGTGGC CGGTCGGGAG ACTTTTAAGG AACAGCCGCT TTCCCTTGCA
TCGGAGTATG CCAACGACGA GGTCGGGGCC CTGGCAAAAG CCTTCGATGC AACCTTCACC
AGGCTGCAGC AGACCCTGCG CCGGGAAGTT CTTTTCACCA GTGATGTCAG TCATGAATTG
CGCACGCCCC TCATGGTCAT CCAGAGTGCC TGCGAGATCC TGGTCGCCAA AAGGGATCTG
GATGACTACA CCCGCCAGAG AATCGAATCG ATCCGCCGGG CCGTGATGAA GATGGAGTCA
TTGGTCGAGG CGTTTTTAGC CCTTGCCCGC GGCGAAGACA CTCCCTCGGA AACGGCTACG
CTGGAGGCAA TCGTGCAATC GGAACTGCCA ACGTGGCAAC AGTTGGCGGA ACAGAAGAGA
AACCGATTCC TTCTCCGGCA GGAAGTGGAA ATCCCGGCGC CAAAGGGGAT CGAATACCCG
GCCGTTTTGC TGCGTACGGT TATCGATAAC CTGATCCGCA ATGCCGTCCA CCACACCGCT
GGAGGCGAAA TCGTTCTGGT TTTGAAAGCC GACAGCTTTG AGCTTCGGGA TACGGGATCG
GGTATTGCCA TAGATGAAAT GACCAAGGTT TTCAAACCCT ATTACCGCGG CACGGCATCT
CACCGTGAAG GTCTCGGGCT GGGATTGTCG CTGGTACAGC GGATCTGCGA GAGAGAACAT
TGGTCGGTCG TCCTTGAGCA AAACCAGCCG CAAGGGTGCT GTTTCAGGGT AAATCTCGCA
TGA
 
Protein sequence
MQFKSKLSQR IILSVVLLTT IVSGLFAIGL TATIHYVEKS LVASELQKDF ARVFADYRNG 
LDLRLDEGSA FFPAGPTLPD YLRSIPTGYT EVVLGDRHRA YYVYHLVEGK TSYFLVKDQT
SFEKAEILLQ RAVLGGFVFC VLISFVLGVF MVKQVIAPVR KLTRQVAGRE TFKEQPLSLA
SEYANDEVGA LAKAFDATFT RLQQTLRREV LFTSDVSHEL RTPLMVIQSA CEILVAKRDL
DDYTRQRIES IRRAVMKMES LVEAFLALAR GEDTPSETAT LEAIVQSELP TWQQLAEQKR
NRFLLRQEVE IPAPKGIEYP AVLLRTVIDN LIRNAVHHTA GGEIVLVLKA DSFELRDTGS
GIAIDEMTKV FKPYYRGTAS HREGLGLGLS LVQRICEREH WSVVLEQNQP QGCCFRVNLA