| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1716 |
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| Symbol | |
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| ID | 3724425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2007067 |
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| End bp | 2008389 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637751320 |
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| Product | outer membrane protein |
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| Protein accession | YP_357129 |
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| Protein GI | 116878538 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000000584875 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCG GGATTCAATC GGTTGGGGTG CTGTTGGCAG GGGTTCTGTC CATGCTGGCG
GTGACACCTG TCACAGCTCT GGAAACGAAC CCGTCAGGTG CTGTTGCCAC CGAAAACGAT
CATAGCCTGT TGAGTGATCT GATTGCAGAG GCTTTGGCCA ATAACCCGGA GTTGCAATCC
GCCAAAGCGC GTTGGGAAAT GTATGAACAT CGGGTCATTC CGTCCCGCAG TCTGGACGAT
CCGCGTTTGA GCTTCGCATT ATCAAATTAT CCCATAGACA GTTTTGCCGA TGATGAGACC
CCTATGACCG GCAAGGAAAT ACAGCTGTCG CAGATGTTTC CTTTCCCGGG TAAGTTGGCG
GCCAAGGGAG AAATGGCTGA ACAACAGGCA TTATGGTATC GGGGCGTTTA CGATGATGCC
CGCCTGCGTC TGGTTCAGCA GGTCAAGGAT GCCTGGTATC AACTCTATTT TAAAGAACAG
GCCATAGATA TCACGCACAA AAATATCACC CTTTTGAAGG ATTTCGTTCG TCTGACGGAA
ACCCGTTACG CCGTTGGAAC CGGTTTACAG CAGGATGTGC TTAAAGCCCA GGTGGAACGA
TCGAAGCTTC AGGATAAGCT TTTTAGCCTG GAGCAACAGC GCATCTCGGC GCTGTCCGAT
CTTAACAGAT TGCTGGGCCG AGCTATTGAT GCAACGTTGT CGTTGCCCGA TGATTTGTCT
CTTACGGAGA TCGATGCAGA GATAAACCGG TTATCCGATT TGTCTCGCAC CCATCGACCT
CTATTTGCCG CCTATGAAGC GATGATTGAC CGTTATAAGG CGCAGCGCAA ATTAGCCAAA
CTCAATTATT ATCCGGATTT CAATGTTTTC GCAGGGTATC GGGTCCGTGA AGAGGTACCG
GGAGATCCGG CCGCAGGCAG CGATTTTATT TCAGCCGGGG TGAGTATCAA TCTGCCTTTG
TGGCAGGCCA AGCGGCGGGC TGAGGTCGCC GAAGCGGATT CGGCTCTGCG CATGGCCTGG
AGCCAGCTCG CTGACATGCG CAATGGGGTC GATTCCACGA TTATCGACCA GGTGGCCCGA
ATGAAGAAAG ACCGAGATCT GGTGACGTTG TATCGAACGG GCGTCATTCC CCAGGCCCAA
CAGAGTTTTG AAGCAAGCCT GGCGGCTTAT CAGGTCGGTG ATACCGATTT TCTCAATCTT
CTCGATGGGC TGATGACCCT TTATCGTTAT CAGATAGATT ATCAGCGTGC CCTGAGTGAC
CACGAGCGTA GCGTCGCCCG GCTGGAAGCG GCGGTGGGGG TGACATTCGC TTCTCAGGAA
TAG
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| Protein sequence | MKIGIQSVGV LLAGVLSMLA VTPVTALETN PSGAVATEND HSLLSDLIAE ALANNPELQS
AKARWEMYEH RVIPSRSLDD PRLSFALSNY PIDSFADDET PMTGKEIQLS QMFPFPGKLA
AKGEMAEQQA LWYRGVYDDA RLRLVQQVKD AWYQLYFKEQ AIDITHKNIT LLKDFVRLTE
TRYAVGTGLQ QDVLKAQVER SKLQDKLFSL EQQRISALSD LNRLLGRAID ATLSLPDDLS
LTEIDAEINR LSDLSRTHRP LFAAYEAMID RYKAQRKLAK LNYYPDFNVF AGYRVREEVP
GDPAAGSDFI SAGVSINLPL WQAKRRAEVA EADSALRMAW SQLADMRNGV DSTIIDQVAR
MKKDRDLVTL YRTGVIPQAQ QSFEASLAAY QVGDTDFLNL LDGLMTLYRY QIDYQRALSD
HERSVARLEA AVGVTFASQE
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