Gene Pcar_1693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1693 
Symbol 
ID3724402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1976643 
End bp1977743 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content54% 
IMG OID637751297 
ProductPSP-like protein 
Protein accessionYP_357106 
Protein GI77919291 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0000254469 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGAA TCGTTTCCAT AAAATTCCGA ACGGCCGGAA AACACTATCA TTTCAATGCC 
GGCGACCTCG AACTGAAGTC CGGACAGTCG GTCATCGTCG AAACCGACCG GGGCCGCGCT
CTGGGTACCG TTGTCGCCCC TCCCAAGGAA GTCCAGAAGG ACAAGCTACC GGAAAATCTG
AAAAATGTTC TTCGTACAAC CTCGGAAGAG GATATTGCCT TGGCCGAAAG ATCCGCCGCC
AGGGAGAAAG AAGCTTTTCG CTTCTGTCTT GAGCGCATCA AAACCCGTCA GATGGAAATG
AAACTGGTAC GGGCCGAATA TCTTTATGAT GGCTCCAAGA TCATTTTCTA CTTTACGGCC
GATGGCAGAG TCGACTTTCG CGAACTGGTC AAAGATCTGG CGCACTATTT TCACACCCGC
ATTGAAATGC GTCAGATAGG CGTCCGCGAC GAGGCGAAAC TCATCGGTGG CATCGGCATC
TGCGGCCGCG CCTTATGCTG CTGCACTTTT CTGACGGACT TCGTTCCGGT ATCCGTGAAG
ATGGCCAAGG AACAGGGACT GGCCCTCAAT CCCAACAAGA TTTCCGGACA GTGCGGGCGT
CTGTTGTGCT GTCTGAATTA CGAATACAAA ACCTATCTGT CCCTCAAACA GCGCATGCCT
AAATGTGGGC GACAGGTCAG CGTGGAGGGC AAGGAAGGTG AAATCGTAGG TCAGAATGTT
CTCGACCAGA CGGTTACCGT CAAACTTGAA GAAAACCAGA AAATCGAAGT TCCACTCGAT
AAAGTACAGG TTTCCCAAGG CCCGGCCAGG GAAAAGTCCG GCAAGGACGC TCCCCAGGCC
AAACCACGCT CAAGAGGCCC TCAACGCCCG CGCCGAGGTG CCCAGAAGAA AGAGTCTGCC
GCGACGGGCA AGAGGGAAGA GGACAAAGGC AAACAGCCCA CGCAAGGCAA AACCGCGTCG
AAACGTCGCG GCCAGAAGTC GGCCCAGCGG GAAACACCTG CTCAGACCGA AGGTACGCAG
AGTGCCCGTA AAAGACCGAG AAGAAAAAGT CGTTCCAAAA ATCGCCCAAC TAAAAATACG
CCTCCAGGAG ACAAGCAATG A
 
Protein sequence
MTRIVSIKFR TAGKHYHFNA GDLELKSGQS VIVETDRGRA LGTVVAPPKE VQKDKLPENL 
KNVLRTTSEE DIALAERSAA REKEAFRFCL ERIKTRQMEM KLVRAEYLYD GSKIIFYFTA
DGRVDFRELV KDLAHYFHTR IEMRQIGVRD EAKLIGGIGI CGRALCCCTF LTDFVPVSVK
MAKEQGLALN PNKISGQCGR LLCCLNYEYK TYLSLKQRMP KCGRQVSVEG KEGEIVGQNV
LDQTVTVKLE ENQKIEVPLD KVQVSQGPAR EKSGKDAPQA KPRSRGPQRP RRGAQKKESA
ATGKREEDKG KQPTQGKTAS KRRGQKSAQR ETPAQTEGTQ SARKRPRRKS RSKNRPTKNT
PPGDKQ