Gene Pcar_1691 details

Gene Information

• Locus tag: Pcar_1691
• Symbol: tmk
• ID: 3724400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1974958
• End bp: 1975608
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637751295
• Product: thymidylate kinase
• Protein accession: YP_357104
• Protein GI: 77919289
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 3.38478e-17
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTTTT TCATAAGCCT TGAAGGCATT GAAGGAAGCG GAAAAACTAC GCAGATCAAA 
CGCTTGGCCG ACCGGCTTGA AAGCCTGGGC CATGCGGTAC TGATCACGCG CGAACCCGGC 
GGCTGCCCTA TCGCGGATCA GATCCGACAG ATTCTGCTTC ATCCCGATAA CGGCCACCTG 
GACCCGAAAG CCGAATTGCT TCTATACGCC GCGGCACGTG CACAACATGT GGCCGAGGTT 
ATTCGCCCTG CCCTGGACCA AGGCAAGATC GTTCTGTGCG ACCGTTATTG CGATGCAACA 
CTCGCCTATC AGGGGTACGC CCGTGGCCTG GATCTGCCTA TGGTCAAACA GCTCAACGAG 
CTGGCCGCCG GGAATTGCCG GCCTCACTTG ACTTTGTTGC TGGACATGCC CCACGACCGT 
GGCCTGCTAC GTGCCCGCAG CCGGAATGCC CTGGGCGCAG GACCTGAAGA AGGACGCTTC 
GAGCAGGAAT CCCTGGCTTT TCACAACAAA GTGCGCCAGG GTTATCTCGA CCTGGCCCGC 
CAGGAACCGC AGCGCATCAA AGTTGTCGAT GCCAATGGTA CTCTCGACGA GGTGTGCCAC 
CGTATCTGGC TCACAACCTC CAACGCGCTC AACCTCCCGG GGGGAATGTA A 

 

Protein sequence

MSFFISLEGI EGSGKTTQIK RLADRLESLG HAVLITREPG GCPIADQIRQ ILLHPDNGHL 
DPKAELLLYA AARAQHVAEV IRPALDQGKI VLCDRYCDAT LAYQGYARGL DLPMVKQLNE 
LAAGNCRPHL TLLLDMPHDR GLLRARSRNA LGAGPEEGRF EQESLAFHNK VRQGYLDLAR 
QEPQRIKVVD ANGTLDEVCH RIWLTTSNAL NLPGGM