| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1684 |
|---|
| Symbol | |
|---|
| ID | 3724386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1964321 |
|---|
| End bp | 1966054 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637751281 |
|---|
| Product | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| Protein accession | YP_357097 |
|---|
| Protein GI | 77919282 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0417932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTATA GATGGCTTAA AATGGGTGAA TTGCTCGTTG AGTTTGGAGC TATCGCACCA
GGGCAGATCG AAGTCATTTT GCAAAGAATG AAAGTCCTGG GGTTGCGATT TGGCGAAACC
GGTATTGAAC TGGGTTTTTA TGATGAAGAA ATTCTGGCCC GGGTATTGGC TCGTCAATTC
GGTCTCGAAT ATGTAGATAT GGCTTCCTTT CACCCTGACC CGGAATTGCT CGATCAATTA
CCGGAAGACC TGACTCTTCG ATTCGGAGTC GTACCGTTGC AACGTACCGA TAAAGGTGTG
GTTGTTGCGA CTGCAGACCC CACGGATATC GACCGCCTCG ATCAGCTTAA ATGGGCCGTA
AGTGTACCGG TTCTCTATAA AGTCGCTGCT AAAAGCCATA TCCTGAGACA CGTTGCCGGC
AGTCAAACCA TAACTGGTGA AGCTCTTGAA AGCACTTTGG AGAAGTTCCG TAGTATTCCT
GATGATGCGC TTGAAGAGGA TAAAGACTTG TTGGCCGGGG AGCAACCGGA TGCGGAACAT
AGTCCGGTTA TCAAGTTGAT CGACACGACT TTGGTCGATG CCCTGAGTAA GCGGGCCAGC
GATATTCATA TCGAGTCCGG TCCGCAAGGG GTAACCGTCA AATATCGTAT TGACGGCGTG
CTTTCCCGGG CCATGGAACC GCTCGATCGT AGATTCCAGG GCCCGATCAT TTCGCGCATT
AAAGTTATGA GTGAATTGGA TATCTCCGAA CGCCGTATTC CCCAGGATGG CCGTTTCAAG
TCTCGCATCG GAGGTCGTTC TATCGATTTC AGGATCTCCA TTTTGCCAAG CAGTTACGGC
GAAGATGCCG TGATTCGGAT TCTGGATAAA GGCAATATAG CCGCAGATCT CAAAGGCTTA
AGCCTGGAGG CGCTGGGGTT TAACCAACGG GAACTCAAAC GGTTTCGTAA ACAGATTCGT
GCTCCCTATG GAATGGTGCT GGTTACCGGC CCGACCGGCA GCGGCAAAAC CACGACATTA
TACGCGGCGC TCGGGGAGAT TCATACCGAA CAGGAAAAAA TCATAACTAT CGAGGATCCC
GTCGAGTATC AGGTGCCCGG TATCGTCCAG GTGCCGGTGA ACGAAAAGAA AGGTTTGACC
TTTGCCCGGG GACTTCGTTC CATACTCAGG CACGATCCGG ACAAAATCAT GGTCGGGGAG
ATTCGCGATT CGGAAACCGC CGAAATTGCG GTGCAATCGG CGTTGACCGG CCACCTGGTT
TTTACCACGG TGCATGCCAA CAACGTGTTT GACGTATTGG GTCGTTTTTT ACATATGGGG
CTCGATCCCT ATCACTTTCT TTCCGGTCTG AATATGGTAC TGGCCCAACG GCTGGTCAGA
AAAATCTGCC CACATTGCAA AGAGCAGGTT CATTACGACC CTTCGGTCCT GTCCAGGGCT
GGCCTCGACA GCGAACTTTA TGGCAAACGC GCATTTTACG AAGGTCGTGG TTGTGAACAT
TGTCATGGGC TGGGGTATTC CGGTCGCTCT GCCATCGTCG AGTTACTCGA AGTCAATGAT
GAATTACGGG AAATGATTAT CGGTCGGGCC GCTGTGGGAC AATTGCGCGA ATATGCGGCG
CGTATGGGAA CGGTTTTTCT TCGACAGGCG GCGCTGGAGA AAGTTTTCGA AGGTATTACC
AGTCTGCCCG AAATCAACAG GGTAACGTTT GTCGAGGGGG AAAGTACGCT ATGA
|
|---|
| Protein sequence | MVYRWLKMGE LLVEFGAIAP GQIEVILQRM KVLGLRFGET GIELGFYDEE ILARVLARQF
GLEYVDMASF HPDPELLDQL PEDLTLRFGV VPLQRTDKGV VVATADPTDI DRLDQLKWAV
SVPVLYKVAA KSHILRHVAG SQTITGEALE STLEKFRSIP DDALEEDKDL LAGEQPDAEH
SPVIKLIDTT LVDALSKRAS DIHIESGPQG VTVKYRIDGV LSRAMEPLDR RFQGPIISRI
KVMSELDISE RRIPQDGRFK SRIGGRSIDF RISILPSSYG EDAVIRILDK GNIAADLKGL
SLEALGFNQR ELKRFRKQIR APYGMVLVTG PTGSGKTTTL YAALGEIHTE QEKIITIEDP
VEYQVPGIVQ VPVNEKKGLT FARGLRSILR HDPDKIMVGE IRDSETAEIA VQSALTGHLV
FTTVHANNVF DVLGRFLHMG LDPYHFLSGL NMVLAQRLVR KICPHCKEQV HYDPSVLSRA
GLDSELYGKR AFYEGRGCEH CHGLGYSGRS AIVELLEVND ELREMIIGRA AVGQLREYAA
RMGTVFLRQA ALEKVFEGIT SLPEINRVTF VEGESTL
|
|---|
| |