| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1679 |
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| Symbol | |
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| ID | 3724381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1959401 |
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| End bp | 1961704 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751276 |
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| Product | type II secretory pathway, component HofQ |
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| Protein accession | YP_357092 |
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| Protein GI | 77919277 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAACC CGATGAATAA AGCGATAAAG CAATCCGGTT TGTTGTTGGT GCTGATACTT
GTATTGGCAG GTTGTGCAGG GAAGCAGGCC TTCAATGCCG GGGACAGATT CTTTCAACAG
GGCAAATACG ACCTTGCCAT GGAGCAGTAT GCCGCGGCGG TTGCTGCCGA GCCGGAACGA
CACGAATATC GTCTGAAATG GCTTAAAGCC CGGAATCGAT CGGCATTGCA GCATTACGAA
AGGGGAAATC AGCTGGCCGC GGAAAACGAG ATTTCCCTGG CGGCTGCGGA ATACCGTCAG
GCGGTAACCC TCGATGGCAA TCTTGCGGTT GCGGTGCAGA GATTGAGGGA GCTTCAGGCT
CGGGTAGAGG CGCAACAGCT CGTAGCCGAA GCGGAGGAAT TCTACGAAAA GGGAAAATAC
GGTCAGGCAA AAGCCAACCT GAGAAAAGCA CTGCATCTGA TGCCATCCGA TCCCGGTGCC
CAAGATCTTT TGCGCCAGGT GGAATTGGCC AGTCAGACCA TCATGGATGG TTACGAGTTG
GCTTTGAGTT CACGTGAACC TTTGAGTCTT CAATTCGCCG AGATGGATTT GCACCAGGCC
TTTGCAGTTT TGAGCCAGTT GTCCGGGATT CATTTTATTC TGGATGAGGA TATAAATCCG
CGCCCTGTTT CCCTGTTGCT TAAAAAAGCC TCCTTCGCTC AAGTGCTCGA TCTTTTGCTC
AAACTCAACG GTTTGGGCAA GCGGGTTCTC AATAGCCAGA CCATTCTTGT CTATCCCCGA
ACCAAGGAAA AGGAAAAGCA ATACGAGGAC CGGATTATAC AGGTATTTTA TTTGTCGCAT
ATTGAAGCCA AAAAGGCTGT GAATCTGTTG CGGACCATAC TGCAAACGCG AAAAATATAT
GTGCATGATG AACTTAACGC GATTGTCATG CGTGATAAAC CCGAGGTCAT CGAGCTGGCC
AGGCAGATAT TGGAGGCTTC CGACCGTAAC GATTCGGAGG TTGTTTTCGA TCTCGAACTG
GTCGAGGTCA GTCATCGCGA TTTGCTGGAT ATCGGGCCGA AACTCAGTTC CTATTCCATC
AGTGCCGGTA TGGGGCGAAC GATCCTCGAT ACCGATGGCA ATGTCGTGAC TAACCTGGTG
AGCGATACCC TGGCGGCGGG AGGCACGACA GATACCCTGG TAAGAAGTTT CAGCCGTCTC
GAATCCTTCT ATACCCTGCC GACCGCGACC TTCGATTTCG CCAAGACACT GATTGACAGC
GAAATCCTGG CCAATCCGAA AATCCGGGTT AAAAATCGCG AAAAGGCCAA AGTGCATATC
GGCACCAAGG AGCCGATCGT CACGACCAAT ATCAGCACCA CCACCGGGGA TGTCACCTCC
ACCAATGTCC AGTATATCGA TGTCGGGGTC AAGCTCGATG TCGAACCCAA TATTCAGCTC
GACGATACCA TCGTCACCAA ACTCACCCTG GAGGTCAGCA GCATTCTGGA AAAGGAAGAG
ATTGCCGGTG GCGGCTCGGC ACTGCGTATT TCAACCACCA ATGCCGGTTC CTCGCTCATT
TTGAAGGATG GCGAACGTAC AATTATCGGC GGTCTGATAC GTAATGACCT GTCCGACACA
CGGGATACCT TGCCCTTTAT CGGCAGCATC CCGATTATCG GTCATCTTTT CACCGGCCGC
AGCAAGGAAA AAAACAAGAG TGAAATCCTG CTTTCCATTA CTCCGCATAT CGTACGCAGC
GTCGATATGC CGAGGCCGGA TGTGGCGACC ATATGGTCGG GTGGCGAGGA CGATCTCGCT
CCGGGTGCGC GATTTGCTCG CTTTACGGAT GAAGACCCGG CCGAAACGTC TGAGCCGAGC
AAGACGGAGG CGGGGCCGAA GGATTCCACG CGGCCTCATG AGTTTCAACT TTCCGGCCCG
GAAACAGTGG CTCCGGAGCG GTCCTTTGCT CTGCAAGTGT CGGCGATGGG GATACGGAGC
CTTCTGTCAG CGCGGTTTGC TTTGCGCTAT CCCTCGGCTC TGGTTCAGCC GGTCGGGGTT
GTCCCGGGCG CTTTGATGGG CACGCAGGGG CAGGAGAGTC ATGCCACCAT GTCGGCTTCC
GATGGTTTCG AAGAGGTGGT CATTGATGTG CAGCGTGAGG TGGGGAAAAG CGGCGTATCA
GGGGAAGGCC CTGTCGCCAT TGTGGAATTC AAGACCATTG GCGAGGGGAG CCTTGTGTTT
TCGCTCGACG ATTGCACGGT AAATACCGGG CAGGGGCTGA GTGACGCCTG CACGGCCACT
CCTTTGACGA TCGAGATGGA ATAA
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| Protein sequence | MANPMNKAIK QSGLLLVLIL VLAGCAGKQA FNAGDRFFQQ GKYDLAMEQY AAAVAAEPER
HEYRLKWLKA RNRSALQHYE RGNQLAAENE ISLAAAEYRQ AVTLDGNLAV AVQRLRELQA
RVEAQQLVAE AEEFYEKGKY GQAKANLRKA LHLMPSDPGA QDLLRQVELA SQTIMDGYEL
ALSSREPLSL QFAEMDLHQA FAVLSQLSGI HFILDEDINP RPVSLLLKKA SFAQVLDLLL
KLNGLGKRVL NSQTILVYPR TKEKEKQYED RIIQVFYLSH IEAKKAVNLL RTILQTRKIY
VHDELNAIVM RDKPEVIELA RQILEASDRN DSEVVFDLEL VEVSHRDLLD IGPKLSSYSI
SAGMGRTILD TDGNVVTNLV SDTLAAGGTT DTLVRSFSRL ESFYTLPTAT FDFAKTLIDS
EILANPKIRV KNREKAKVHI GTKEPIVTTN ISTTTGDVTS TNVQYIDVGV KLDVEPNIQL
DDTIVTKLTL EVSSILEKEE IAGGGSALRI STTNAGSSLI LKDGERTIIG GLIRNDLSDT
RDTLPFIGSI PIIGHLFTGR SKEKNKSEIL LSITPHIVRS VDMPRPDVAT IWSGGEDDLA
PGARFARFTD EDPAETSEPS KTEAGPKDST RPHEFQLSGP ETVAPERSFA LQVSAMGIRS
LLSARFALRY PSALVQPVGV VPGALMGTQG QESHATMSAS DGFEEVVIDV QREVGKSGVS
GEGPVAIVEF KTIGEGSLVF SLDDCTVNTG QGLSDACTAT PLTIEME
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