| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1678 |
|---|
| Symbol | |
|---|
| ID | 3724380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1958909 |
|---|
| End bp | 1959400 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637751275 |
|---|
| Product | type II secretory pathway, pseudopilin PulG |
|---|
| Protein accession | YP_357091 |
|---|
| Protein GI | 77919276 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 74 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAACA ATAAAAACCG CCTGTTGTCT TATGCGCACG GTTTCACTTT GATCGAGGTC
GTCGTTACAG TGGCCATACT CGGCATTCTG GTGACGGCTG TGCTGCCTTT GGCCGAAGTC
ACCGTTAAGC GGACGCGGGA AATGGAGTTG CGACGTGCCT TGAGGGTCAT GCGGATGGCC
ATCGATCAGT ACAAGGAGGA TTACGACCAG GCGGTCAAAG ATAACCATAT CATTGCAGAA
GCGGATCAGA CCGGTTATCC GGCCAGCCTT GACGTACTGG TCGAAGGCAA GGATTGGAAG
GGCCTCTACG ATTTTCCTCG AAAATATCTT CGAAAATTGC CTCGCGACCC CTTCGATGAG
GGGTTGGGAT GGGGGCTGCG GGGATACCGG GATGCCCCGG ATTCGAGCAC CTGGGATGGT
AAGGATGTCT ATGATATCTA CTCTCAAAGC GAACAGACGG CACTCGATGG CACGATTTAT
AGCAGCTGGT GA
|
|---|
| Protein sequence | MGNNKNRLLS YAHGFTLIEV VVTVAILGIL VTAVLPLAEV TVKRTREMEL RRALRVMRMA
IDQYKEDYDQ AVKDNHIIAE ADQTGYPASL DVLVEGKDWK GLYDFPRKYL RKLPRDPFDE
GLGWGLRGYR DAPDSSTWDG KDVYDIYSQS EQTALDGTIY SSW
|
|---|
| |