| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1668 |
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| Symbol | ispA |
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| ID | 3724371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1948755 |
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| End bp | 1949645 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637751266 |
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| Product | geranyltranstransferase (farnesyldiphosphate synthase) |
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| Protein accession | YP_357082 |
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| Protein GI | 77919267 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000000016201 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCTCA ATGCCTACTT GAAAGAACGT CGGGCTCAGG TGGATAAGGC ACTTGATACC
TATCTGCCCG GGGAGGATGT GCTCCCCATA AGCCTTCACA AGGCGATGCG CTATTCCACG
TTTGCCGCCG GCAAACGTAT TCGGCCGATC CTCATGATGG CTGCCTGCGA GGCTGTCGGT
GGTACCGTGG ATAAAGTCAT GCCGGCAGCC TGTGCCATGG AGATGATACA TACCTATTCC
CTGATCCATG ACGATTTGCC GGCCATGGAT GATGATGATT TTCGCCGCGG GCGGCCTACG
TGTCACAAGG TTTATGGTGA TGCCCTTGCT ATCCTGGCCG GCGATGCATT GTTGACCGAA
GCATTCATTC TTCTGTCGCG ACTGGGAGAG GATGGTGGCG TTTCGCTCGA GGCCGCCCGC
AGGGTCAGTG CGGATATTGC GCGCTGCGCC GGTTCCATGG GGATGGTCGG CGGCCAAGTG
GTTGATATGG ATTCGGAGGG TAAAGAGATT GATCTGGCGA CTCTCGAATA TATCCATACC
CGTAAAACCG GGGCGCTGAT TCTGGCATCC GTACAATCCG GTGCCGTGCT TGGCGGGGCC
TCTTCAGAGC AGGTTGATAA CTTGGGCCGC TATGCCAAGG CGGCAGGTTT AGCCTTTCAG
GTTGCCGATG ACATTCTCGA TATTGTCGGT GATCAGGAAC TGCTCGGCAA GGATGTCGGC
AGCGACCAGG AACGTGGCAA AGCGACTTAT CCGGCTTTGC TCGGCCTTGA TGCCGCTCGG
GACCGCGCCA AAGAGTTGCG CGATGTAGCC CTCGAAAGTT TGTCCGGCTT TGATGAACGC
GCTGAACCGT TAAGAAGCAT CGCACATTAT ATCGTGGACC GCTCCTTCTG A
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| Protein sequence | MDLNAYLKER RAQVDKALDT YLPGEDVLPI SLHKAMRYST FAAGKRIRPI LMMAACEAVG
GTVDKVMPAA CAMEMIHTYS LIHDDLPAMD DDDFRRGRPT CHKVYGDALA ILAGDALLTE
AFILLSRLGE DGGVSLEAAR RVSADIARCA GSMGMVGGQV VDMDSEGKEI DLATLEYIHT
RKTGALILAS VQSGAVLGGA SSEQVDNLGR YAKAAGLAFQ VADDILDIVG DQELLGKDVG
SDQERGKATY PALLGLDAAR DRAKELRDVA LESLSGFDER AEPLRSIAHY IVDRSF
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