| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1658 |
|---|
| Symbol | prc |
|---|
| ID | 3724361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1936210 |
|---|
| End bp | 1938369 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637751256 |
|---|
| Product | carboxy-terminal protease for penicillin-binding protein 3 |
|---|
| Protein accession | YP_357072 |
|---|
| Protein GI | 77919257 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000000305852 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA AAAAAATACG CTTTTATCTG CTTGCCGTTA TTTTGCTGAT CGCAGTTTCC
GGTTCCTGGG TTGGCCTGGC CTCGCAACAA CCTCCCGAAG ATCTCGAGCA TTTGAGAATC
CGCCTCCTGA CGCATCTCAT CAGCCAGCAA ATGAGCACCA ATCATTTCAG TCATAAAGCC
CTCGATGACA CCTTGTCCGC AGCGGCTTTC GATCTGTATG CCCAACAACT CGATTACCAA
AAAAGATTTC TTATTCGCGA GGACATCGAT CGATTGGGTG CGGAACGACA CAATATTGAT
GATCAAATTG TTCGTGGCGA GCTTTCATTG CCTAAAACCG GGGCGCGTTT GTTGCGGCTT
CGGGTGGAAA CGGTTTCCGG GATGATTCCG GAGATTCTGG ATCATGGGTT CGACTTTACG
GTCAACGAGG TTTTTGAGAC TGATCCTGAA AAAATCGACT ATGCCGAGGA TATGGCCGGT
TTAAAAAACC GTTGGCAGCA GATCCTCAAA TACCAGGTGC TGATGCGTTA TGTTCAACTG
TATGAAGAAC AAAACAAGGC GGCTGCATCG TCGGAACATA AAGCCCTTCC GGTCAAGGCC
GTCATAGACG CTGCCCTGCT TGAACAGGCT GTTCAAAAGG TGCGGCGCAG TACGGAGCAT
CTTCTCGATC GCCTTTTGGA GCAGACGGAA AAAGATCATT TCGAGCGTTT TCTCAATGCG
TTCGTTCGAG CCTATGATCC GCATTCGGCT TATCTGGCAC CGGATGCCCT GGAAGATTTC
GAAATCTATA TGAAGGGTTC CTTGGAGGGT ATCGGGGCGA CCTTGCGAGA AGATGACGGG
TTCATCCGGG TCGTTGAAAT CATCCCCGGG AGTCCTGCTG CCAAGCAGGG GCAGCTGGCC
GCTGAAGATA TCATCCTTAA AGTCGGAGAA GGGAACCAGG AGCCGATAGA TGTCACTGAA
ACCCGTTTAC GCGATGCCGT GCGTTTGATC AGAGGGAAGA AGGGTACGGA AGTACATCTG
ACTATTCGTA AGCCGACCGG CGCCGAGCGG GTGATTGCCA TCACTCGTGA TGTTGTCGAA
ATCGAAGAGG GTTTTGCCAA AAGTACCACG GTGCCGGTTT CCGGTCACAA GGGCCAGTGT
TATGGCTATT TGCGGATTCC CTCTTTTTAT CGAGATTTTC AGGGCAGTCG CGAGGGACGA
CAGGCACGCA ATGTTACCGA TGATGTCCGG CGCGAGTTGG AGCAGCTTAA AAAACAGGGA
ATAACCGGCC TTGTTCTGGA TTTAAGGAAT AACGGCGGCG GTTCGCTGTC CGATGCCATT
AGTGTTGCCG GTCTGTTTAT TGCCTCAGGC CCCGTGGTTC AGGTGAAAAG CAGTGATGGA
GATATCCGTG TTTTTGAAGA CGAGGATCCG GGTATCGTCT ATGGCGGTCC GCTGGTGGTT
ATGGTCAACC GATTCAGCGC TTCGGCCTCT GAAATTCTGG CTGGTGCGAT ACAGGACTAT
GGGCGTGGCG TTGTCGTGGG TGGGGACGGG ACGCATGGCA AAGGGACGGT TCAGGCTATT
TTCGACATGG ATCAGCCGCT AACCTATAGT CCTCTGGCCA AACTCAAGCC CTTGGGTGCC
TTAAAGGTTA CCGTGCAGAA ATTTTACCGG ATAAACGGCG GGTCTACTCA GGTTAAGGGG
GTTGAGCCGG ATATTCATTT GCCTGATCGA TTGGCTTTTC TTGAATCCGG GGAAAAATAT
ATCGAATATG CGTTGCCCTG GGATACGATC ACGAACGTTC CATTCAAGCG CTGGAGTCGC
CTTCCGAATG TGGCCGAATT ACGTCGTTTA AGCGAACAAA GAGTCACAAA TGGGCACCGG
TTTGATGCCA TTGTCGCAGA AACACGACGT AATCGCCAGC GTAGTCGGGA TACCCTGCGG
TCTGTCAGGC TGACCGACAT ACTTGAGGAG CGATCGGCTC TGCGTGCAGC AGGCGCCGAA
GATTTCGTAG AGGATCTGGC CTCCAAACGA TTGTCCCCCG ATAAGGATTT TGAAAATCTG
GCGGATGAAA TCTCTGGGGA TTTGTATGTG GGGGAGGCCA TGGCGGTACT TACCGATATG
AAACAGCTGA CGGCCAATTC AGACTCTCGA ATTGCCGGGC AGTTGTCTGC AGTGCATTAG
|
|---|
| Protein sequence | MKFKKIRFYL LAVILLIAVS GSWVGLASQQ PPEDLEHLRI RLLTHLISQQ MSTNHFSHKA
LDDTLSAAAF DLYAQQLDYQ KRFLIREDID RLGAERHNID DQIVRGELSL PKTGARLLRL
RVETVSGMIP EILDHGFDFT VNEVFETDPE KIDYAEDMAG LKNRWQQILK YQVLMRYVQL
YEEQNKAAAS SEHKALPVKA VIDAALLEQA VQKVRRSTEH LLDRLLEQTE KDHFERFLNA
FVRAYDPHSA YLAPDALEDF EIYMKGSLEG IGATLREDDG FIRVVEIIPG SPAAKQGQLA
AEDIILKVGE GNQEPIDVTE TRLRDAVRLI RGKKGTEVHL TIRKPTGAER VIAITRDVVE
IEEGFAKSTT VPVSGHKGQC YGYLRIPSFY RDFQGSREGR QARNVTDDVR RELEQLKKQG
ITGLVLDLRN NGGGSLSDAI SVAGLFIASG PVVQVKSSDG DIRVFEDEDP GIVYGGPLVV
MVNRFSASAS EILAGAIQDY GRGVVVGGDG THGKGTVQAI FDMDQPLTYS PLAKLKPLGA
LKVTVQKFYR INGGSTQVKG VEPDIHLPDR LAFLESGEKY IEYALPWDTI TNVPFKRWSR
LPNVAELRRL SEQRVTNGHR FDAIVAETRR NRQRSRDTLR SVRLTDILEE RSALRAAGAE
DFVEDLASKR LSPDKDFENL ADEISGDLYV GEAMAVLTDM KQLTANSDSR IAGQLSAVH
|
|---|
| |