Gene Pcar_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1621 
Symbol 
ID3724321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1897242 
End bp1897676 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content53% 
IMG OID637751216 
Producthypothetical protein 
Protein accessionYP_357035 
Protein GI77919220 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTCT CCAAAACCGA CTCCTGTTTT GTCTGCGGTG GCCATAATCC CATGGGGATA 
AAGGCCTCCT TTCAGACCGA TCATGACCTG TTATGTGCTT TCAGCCGTGT CACGCTGGAG
GAACATTTTC AGGGGTGGGG GAGGATTGCG CACGGTGGTG TCCTTGCTGC GTTGCTCGAC
GAAACGTGTA TTTATGCAGC CATGGGTCTG GGAGGACAAG CCGTTACAGC CGAATTGCAG
GTACGTTATC GTAAACCTGT TCCCTGCGGA TGCGAGATAA CCTTGTTCGG GGAAGTGCTC
AGTCATCGCA GACGCATTGT GCGTGTACGT TCGAGACTGG TGGTATCCGG AGATATCTGC
GCAGAAGCCG AAGCACGCCT GTTTATCGAC AGATCTTCAT CTCAATCACC TGGAATTCCC
CCCGAGCAGC AATGA
 
Protein sequence
MQLSKTDSCF VCGGHNPMGI KASFQTDHDL LCAFSRVTLE EHFQGWGRIA HGGVLAALLD 
ETCIYAAMGL GGQAVTAELQ VRYRKPVPCG CEITLFGEVL SHRRRIVRVR SRLVVSGDIC
AEAEARLFID RSSSQSPGIP PEQQ