Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1604 |
Symbol | hndC-3 |
ID | 3724304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1873213 |
End bp | 1874673 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637751199 |
Product | NADP-reducing hydrogenase chain C |
Protein accession | YP_357018 |
Protein GI | 77919203 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTC AGCTTAGAAT AGCCACCCGC AACAGCGGGT TTATCGATCC GGAATCCGTC GAGTCTTACA TTGCCGTCGG CGGCTACCAG GCTCTGGGCA AATGCCTGTC CAAAATGAAG CCTGCCGACG TTATCGAACT GATGAAAAAC AGCGGTCTGC GCGGCCGTGG CGGCGCAGGT TTCCCCACCG GTGTAAAATG GGGTTTTGCC GCCAAGTACG AGTCCGACAT CAAGCATGTC GTATGTAACG CCGACGAAGG TGACCCGGGG GCATTCATGG ACCGCGCGGT TCTCGAAGGC GACCCGCACA GCGTTCTCGA AGCTATGGCC ATTGGCGCTT ACGCCATCGG CGGCAACAAA GGCACCATCT ACATCCGTGC CGAGTACCCG CTGGCCATTG CCCGTCTGAA AATGGCCATC GAGCAGGCCA AGGAAATGGG CGTGCTGGGC GACAACATCA TGGGCACCGA TTTCTGTTTC GACCTCGAGT TGAAATACGG CGCCGGTGCG TTTGTCTGTG GCGAGGAAAC CGCCCTGATC AACTCCATGG AAGGTAACCG CGGCGAGCCT TACACCAAGC CTCCTTTCCC TGCTGAAGCC GGTTACTGGA ACAAGCCGAC CATCGTGAAC AACGTCGAGA CCCTGGCCAA CATCCCGGCC ATCATCATGA AGGGCGCTGA CTGGTTCAAC AAGATCGGTA CCGAAACTTC CAAGGGCACC AAGGTTTTCT GTATCTGCGG TAAGATCGCC AATGTCGGTC TGATCGAGGT TCCCATGGGA ACCACCCTGA AAGAAGTTAT CTACGATATC GGCGGCGGTA TCCCCGGCGG CAAGGAATTT AAAGCCGTTC AGACCGGTGG ACCTTCCGGC GGTGCTTTGA CCTACAAAGA CCTCGATGCT CCTATCGACT ACGAAAACCT CGTGGCACGC CAGTCGATGA TGGGTTCCGG CGGCATGATC GTCATGGACG AAGAAGACTG CATGGTGTCG GTTGCCAAGT TCTTCCTCGA CTTCACCATG GACGAAACCT GCGGCAAATG TACGCCCTGC CGGATCGGCT CCAAGCGTAT CTACGAACTG CTTGACAAAA TCACCATCGG TCAGGGTACC GAGGAAGATC TGGAAAAACT GCGCAGCCTG TCGGTGAACA TCAAGGACAC CGCTCTGTGT GGCCTGGGCC AGACCATGCC TAACCCGGTA TTGTCGACCA TGCGCGTGTT CGAAGACGAG TACCGCGCGC ACGTCATCGA CAAGAAATGT CCTGCCGGCG TTTGCGCCGA ACTGCTCGAA TACACTGTTG TGGACCAGAA GTGCGTTGGC TGTACCCTGT GCGCCAAAGT CTGCCCGGTT AACTGCATCA GCGGTAAGCC GAAAGAAGTC CATGTCATCG ACCAGGCTGC ATGTATCAAG TGCGGCGCAT GTCTGGACAA GTGTAAGTTC GACGCCATCA TCAAACAGTA A
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Protein sequence | MATQLRIATR NSGFIDPESV ESYIAVGGYQ ALGKCLSKMK PADVIELMKN SGLRGRGGAG FPTGVKWGFA AKYESDIKHV VCNADEGDPG AFMDRAVLEG DPHSVLEAMA IGAYAIGGNK GTIYIRAEYP LAIARLKMAI EQAKEMGVLG DNIMGTDFCF DLELKYGAGA FVCGEETALI NSMEGNRGEP YTKPPFPAEA GYWNKPTIVN NVETLANIPA IIMKGADWFN KIGTETSKGT KVFCICGKIA NVGLIEVPMG TTLKEVIYDI GGGIPGGKEF KAVQTGGPSG GALTYKDLDA PIDYENLVAR QSMMGSGGMI VMDEEDCMVS VAKFFLDFTM DETCGKCTPC RIGSKRIYEL LDKITIGQGT EEDLEKLRSL SVNIKDTALC GLGQTMPNPV LSTMRVFEDE YRAHVIDKKC PAGVCAELLE YTVVDQKCVG CTLCAKVCPV NCISGKPKEV HVIDQAACIK CGACLDKCKF DAIIKQ
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