| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1602 |
|---|
| Symbol | hndA-3 |
|---|
| ID | 3724302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 1872270 |
|---|
| End bp | 1872791 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637751197 |
|---|
| Product | NADP-reducing hydrogenase chain A |
|---|
| Protein accession | YP_357016 |
|---|
| Protein GI | 77919201 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 79 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAG GATCAACATG TCAGAAAAGC GGGGAATGCA GAATTCCGGA TCGTGCCACG
TTGCCGGCAA CGCTGTATCG GCAGCTTGCG GATTTCGTAG CTACGCTGCC CACCAAGGAA
GGCCATCTGG TAACGGTTCT CCACAAAGCC CAGAGTCTGT TCGGCTACCT GCCTAAAGAA
GTGCAGGAGT TCGTCGCCGA TCATATGGAA GTATCACTTG CCCAGGTTTA CGGTGTTGTC
AGCTTCTACA CCTTCTTCAC CATGATCCCC AAAGGCAAGC ATCCCATCTC CGTCTGCATG
GGTACCGCCT GCTTCGTTAA AGGTGCTGAT AAGGTTGTTG ACGCCTTCAA AAACCAGCTT
GGTGTTACGG TAAGCGAAGT GACCAGAGAT GGTAAGTTCT CCATCGACTG TCTGCGCTGC
GTTGGTGCCT GTGCCTTGGC ACCGGTTGTT CTGGTCGGAG AAAAGGTCTA TGCCAATGTC
ACGCCTGACC AGGTTAAAGA CATTATTGCT GACTTCGATT AA
|
|---|
| Protein sequence | MQTGSTCQKS GECRIPDRAT LPATLYRQLA DFVATLPTKE GHLVTVLHKA QSLFGYLPKE
VQEFVADHME VSLAQVYGVV SFYTFFTMIP KGKHPISVCM GTACFVKGAD KVVDAFKNQL
GVTVSEVTRD GKFSIDCLRC VGACALAPVV LVGEKVYANV TPDQVKDIIA DFD
|
|---|
| |