Gene Pcar_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1598 
Symbol 
ID3724298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1866460 
End bp1867392 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content53% 
IMG OID637751193 
Producthypothetical protein 
Protein accessionYP_357012 
Protein GI77919197 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAC AACTCGGGAG AAAGAGCCTG TTTCTGGTTT TGTTGGGTTT GTGCGCTGTT 
CCCTTTGTCA CGACGACGGA GGGTTTGGTG GCCGGCATTC TTTTCAGTAT TTTTCTCGGC
AACCCATGGG CTGTTGAATC TTCTGCCTGG AGCAAAAAAC TGCTTCAGAT ATCCGTGGTG
GGGCTCGGCT TCGGATCGGG GATAGGAGAG GTCTGGAGCG TCGGCAGGGC CTCGGTTGTC
TATACCATGG TCGGCATAAC TCTCACTCTT GTTTTAGGTA AATTGCTACG AAAAATTTTC
CCATCCAGTC CCAAAACCGC CGCTCTTATC GCTTTCGGTA CCGCCATCTG TGGCGGCAGC
GCCATAGCCG CCATGGCGCC CGTTCTAAAG TCGGAGGACG ATGAAACGGC CATAGCTCTG
GCCACTGTAT TTACCCTGAA TGCTGTTGCC TTGCTTCTCT TCCCGACGCT GGGACATTTG
TTTGACTTGA GTCAGTATCA GTTTGGAGAA TGGGCCGCTC TGGCGATTCA TGACACCAGC
AGTGTTGTCG GAGCTGCTGC GGCTTATGGC CCCGAAGCCC TGGCTGTCGG AACCACTGTC
AAGCTGACCC GGGCTATGTG GATTGCACCG GTTGCCCTCG GAACAGCTTT GGTGCTCAAA
TCCGATAAAA GGGCCAAGAT CCCGCTATTT ATCATCGGCT TTGTTGCCGC ATCCATGATT
CATACCTTTA TTCCACAATT CGCTTCCATA TATGCGATGC TCGCCGGTGT TGCCAAGCAA
TGCCTGGTGC TTACCCTGTT TTTGATCGGT GCGGGTTTGA GTAAATCGTT GTTGAAAAAA
GTCGGATTCG CTCCGATGGC TTTGGGGCTT ACGCTCTGGT TTCTGGTCGG CAGCCTGACG
TTGGGAGCCA TACTGGCGGG ATGGATTCAT TGA
 
Protein sequence
MIEQLGRKSL FLVLLGLCAV PFVTTTEGLV AGILFSIFLG NPWAVESSAW SKKLLQISVV 
GLGFGSGIGE VWSVGRASVV YTMVGITLTL VLGKLLRKIF PSSPKTAALI AFGTAICGGS
AIAAMAPVLK SEDDETAIAL ATVFTLNAVA LLLFPTLGHL FDLSQYQFGE WAALAIHDTS
SVVGAAAAYG PEALAVGTTV KLTRAMWIAP VALGTALVLK SDKRAKIPLF IIGFVAASMI
HTFIPQFASI YAMLAGVAKQ CLVLTLFLIG AGLSKSLLKK VGFAPMALGL TLWFLVGSLT
LGAILAGWIH