Gene Pcar_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1589 
Symbol 
ID3724289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1855598 
End bp1856434 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content49% 
IMG OID637751184 
Productbeta-lactamase superfamily hydrolase 
Protein accessionYP_357003 
Protein GI77919188 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCG CTGATGTAAA AATCACGATC CTTGTCGACA ACCTGGTTGG TGAAGGTCTT 
ATTGTCGAGC ACGGCTTGTC GTTTTGGATA GAGACAAATG ACCAGCGTAT TTTATTTGAC
ACAGGGCAGG GTGGTGCCCT CAAGAACAAC GCATATGCTC TTGGTGTCGA TTTGAGCAAA
ACGGATATGC TGGTTTTAAG CCATGGACAC TACGATCATA CCGGCGGTCT GCCTTATGTT
TTGCAACGGG CTCATAATGT TCACATTTAT GGTCATCCCG GTATGGTTCA GCCGCGCTAC
AGCATGAGCA ATGGAACCTC CAAATCCATT CAAATGCCAC GTAAATCCAT GATGGCTATT
GATAAATTAC CTTCTAAACA ACTTCACTGG GTTCAACAAC CGATTTTTCT GTCGGATAAA
ATCGGCCTGA CCGGTCCGAT ACCCCGCGAG ACAAGTTTTG AGGACCCGGG AGGTCCGTTT
TACCTTAATC CCGAGGCGAA AATCGCCGAC CCTATTGATG ATGATCTCGC GCTCTGGATT
CGTAAGGACG ATGAACTCAT CGTTTGTGTT GGCTGTGCCC ATGCAGGGTT GGTAAATACG
CTGAACTACA TCAGATCCCT GAATCATGGC CTGAGGATTC GGACTGTTAT CGGCGGGTTT
CATCTGCACA ACGCCAATCG TCAACGTTTG GATGAAACCA TAGCAGCTTT GCGGCAGCTG
GATACGGATA CGGTGGTTGC TTGTCACTGC ACAGGTGAAA CGGCTGTCGA CTTGCTTCGT
GAAAAGCTAG GTGATCGGGT GTCGACTGGG GTCGCGGGGA TGACTTATCA GTTCTAG
 
Protein sequence
MQTADVKITI LVDNLVGEGL IVEHGLSFWI ETNDQRILFD TGQGGALKNN AYALGVDLSK 
TDMLVLSHGH YDHTGGLPYV LQRAHNVHIY GHPGMVQPRY SMSNGTSKSI QMPRKSMMAI
DKLPSKQLHW VQQPIFLSDK IGLTGPIPRE TSFEDPGGPF YLNPEAKIAD PIDDDLALWI
RKDDELIVCV GCAHAGLVNT LNYIRSLNHG LRIRTVIGGF HLHNANRQRL DETIAALRQL
DTDTVVACHC TGETAVDLLR EKLGDRVSTG VAGMTYQF