Gene Pcar_1554 details

Gene Information

• Locus tag: Pcar_1554
• ID: 3724253
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1819165
• End bp: 1819803
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637751149
• Product: L7Ae family ribosomal protein
• Protein accession: YP_356969
• Protein GI: 77919154
• COG category: [K] Transcription
• COG ID: [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000000000000328024
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAGG ATCGGTCGAA GAGCCGTCGG CCTGAACCTG GCAGCGTCGT TAAGTCCGGT 
CCTCAGCGAA CCTGTGCCGG GTGCAGGAAG TCTCTTGACC AGGATCTTTT GGTACGGTAT 
GTTCTCAGCC CGCAAGGTGA GATCGTCATC GATTATCGAA GAAAATTGCC AGGTCGCGGT 
GTTTATACCT GCTTCAATCA CGAATGTGTT GACACCGCCG TAAAACGAGG CCAGCTGCAA 
CGTTCATTAA GGGGCGGCCA GGTTGCTTCC ACGGATGTAT TGTGGCAAGC CCTTCAAGAG 
CAGGTTCGCG CTAAAGTATT GAGTTTAATC GGCATGGCGA GAAAAGCGGG GCAGGTCGTC 
TCCGGCACCC GTCAGGTCTT GTCCGAAATA CGATCCGGAA AACACTTCGG ATTACTTCTG 
CGGGCATCCG ATCTTTCGCC TGCCATTGCC GATAAAGTAG ATAAAACGGC CCGATGTAGC 
GGCATTCCGT GTTTTGCTCC GTTCGGTAAG GAGCACATGG GGCAGTTGCT TGGGAAATCC 
GAACGCGGTG TCGTTGCGTT GAAAAGTGGT TCACTGGCCG TATCCGTTGT GGATGAACTG 
GAACGGCTGG ATAAATTCGC GGGGGAGCTT AATGGGTAA 

 

Protein sequence

MKKDRSKSRR PEPGSVVKSG PQRTCAGCRK SLDQDLLVRY VLSPQGEIVI DYRRKLPGRG 
VYTCFNHECV DTAVKRGQLQ RSLRGGQVAS TDVLWQALQE QVRAKVLSLI GMARKAGQVV 
SGTRQVLSEI RSGKHFGLLL RASDLSPAIA DKVDKTARCS GIPCFAPFGK EHMGQLLGKS 
ERGVVALKSG SLAVSVVDEL ERLDKFAGEL NG