Gene Pcar_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1553 
SymbolnusA 
ID3724252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1817979 
End bp1819199 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content55% 
IMG OID637751148 
Producttranscription elongation factor NusA 
Protein accessionYP_356968 
Protein GI77919153 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01953] transcription termination factor NusA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.02973e-18 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGTAA ATCTTAACCA TATCATCGAA CAGGTTGTGA AAGAAAAGGG CATTGATCGG 
GGAGTTCTGG TCGAAGCCCT TGAGTCTGCC GTGCTTTCTG CAGCGAACAA AAAGTACCGC
AATACTCGCG ATCTGGAAGC TCACTTCAAC GACGGACTGG GGGAGGTTGA ACTCTTTGAG
TTCGTAACGG TTGTCGATGA GGTGGTTGAC TCCTATAAGG AGATCGATCT CGAGGAAGCC
CGTGAAATCG ATGAAGAAGT CGAGGTGGGC GACTCCCTGG GGATGAAGAT AGAAAGCGGC
AACTTCAGCC GCATCGCGGC CCAAACCGCC AAGCAAGTCA TTATTCAGAA GGTGCGCGAA
GCCGAGCGGG AAAAAATATA CAATGAGTTC AAGGATCGTG TCGGCGAACT TGTTAACGGC
ATCGTCCGCA GGTACGAGCG CGGTGATCTT ATCGTCGATC TCGGCCTTGC CGAAGGGCTG
TTGCCTCACC GGGAACAGGT GCCCAGGGAA AACTATCGTC AGGGGGATCG GGCACGCGTG
CTTATCTCCG AGGTTAAAAT CTCTACCAAG GGGCCGCAGA TTATTCTGTC GCGAACCCAT
CCCGGGCTTG TGGCATCGCT TTTCCAGTTT GAGGTGCCCG AGATTGCCGA AGGTATCGTG
GAGATCAAGG CCGTGGCCCG TGAGGCCGGT AGCCGCACCA AGATTGCAGT AGCCTCTTAC
GATCCGGATG TTGACCCTGT CGGCGCCTGT GTCGGCATGC GGGGTTCTCG TGTGCAGAAC
GTGGTTTCCG AATTGCGGGG TGAAAAGATC GATATCGTTC CCTGGTCGCC TGACGTGGGA
CGCTTTGTAT GTGCCTCTCT CGCGCCGGCT GAGGTCACCA GAATCTATCT CGACAACGAT
GAACAGGCCC TGGAAGTCAT TGTGCCTGAC GATCAGTTGT CTCTGGCCAT TGGTAAAAAG
GGTCAGAATG TCCGCTTGGC GGCTAGGTTG ACCGGCTGGA ATATCGATAT CAAGAGCGAG
ACACGTGCCG CAGAGGCCGC CAAGGAGGCC CTTGGGGAGT CCGTGGCTGT TGAAGATGCC
TCGTCTGAGG ATGTGGCATC CGAGGACGCC ACCGTACAGG AATCACCGAG TGTAGATGCG
GTGTTGGATG ATGCTTCGGA CGAAGTGACG GAGGTTTCAG ATTCGAATGA AGAAGGATCG
GTCGAAGAGC CGTCGGCCTG A
 
Protein sequence
MLVNLNHIIE QVVKEKGIDR GVLVEALESA VLSAANKKYR NTRDLEAHFN DGLGEVELFE 
FVTVVDEVVD SYKEIDLEEA REIDEEVEVG DSLGMKIESG NFSRIAAQTA KQVIIQKVRE
AEREKIYNEF KDRVGELVNG IVRRYERGDL IVDLGLAEGL LPHREQVPRE NYRQGDRARV
LISEVKISTK GPQIILSRTH PGLVASLFQF EVPEIAEGIV EIKAVAREAG SRTKIAVASY
DPDVDPVGAC VGMRGSRVQN VVSELRGEKI DIVPWSPDVG RFVCASLAPA EVTRIYLDND
EQALEVIVPD DQLSLAIGKK GQNVRLAARL TGWNIDIKSE TRAAEAAKEA LGESVAVEDA
SSEDVASEDA TVQESPSVDA VLDDASDEVT EVSDSNEEGS VEEPSA