| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1551 |
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| Symbol | |
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| ID | 3724250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1815928 |
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| End bp | 1817232 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637751146 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_356966 |
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| Protein GI | 77919151 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000011157 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAATA TGTCCGATTA TATAGACGAC CTGCACATTG AGTCGCTTGC CTATGGCGGC
AGCGGTGTCG GGCGCTATGC CGGAAAGGTG GTTTTTGTGC CCCTTACCGT GCCCGGCGAC
CACGTACAGT GCCGGATTGT GCGACAAAAA AAACGCTATA TCGAAGCTCG GGCGGAGCGT
GTCCTGGTGG CGTCCGAACA TCGCATCGCA CCGGCTTGTC CCGCCTTCGG GCAATGCGGC
GGTTGTCAGT GGCTGCATCT GCCATACGCC GAGCAATGTC ATTGGAAGGA GACGATTTTT
CGAGACTTTC TGGTGCGCAA GCTCGACGTG GATTCCGAGC TTGTCCGGCC GATTGTGCCA
TCACCCCAGC AATGGGGCTA TCGCAGCCGG GTGCAGCTTA AGTGTCTGAA TACGCCAAAA
GGTTTTCTGG TCGGATTTTA TCGCCGGGGA AGTCATTATG TCATACCGGT AGACCATTGC
CCCATTCTTC ATCCGCTGCT GAATCAAGCC AAGGACCTGT TGCGGTCATG GATCGAAAAT
ACGCGCTGGA GCCAGTTTGT TTCGCAGATC GACCTGGCTG TCGATGACCA GGAGCGGGTG
AGGGCTGTCG TTCATTGCCT GGCCAACGAT GTGGATGACT TCGTGACTCA CCTGAAGCCG
GGTGCCCTGT CGGCGAATAT GGGGCTTTTT GTTCAAACCG GTCGCAAGCA TAATCTGCAA
CATGTGTGCG GGCCGGTGGA GTTGCTGATC GAGGTCGATA CTCCGGAACT GCGACTTGGG
TACGGACCGG GTGGTTTCGC CCAGATCAAC CTGCCGCAAA ATCGAGCCAT GGTGCGCGAG
GTTGTCGGTA CGTTGGTCAG CAATCCGCCG GGGAGGGTGT TGGATCTTTT CTGCGGTATG
GGTAATTTCA GCCTGCCCGT TGCGCGTCTG GCGCAGGAGG TGGTAGGGGT GGAAGCTTAT
CTGCAAAGTA TTGAAATGGC ACGCCTCAAT GCCCGTTTGA ACGAGATAGA AAATGTTTCG
TTCTTTGCCC GGGAAGCGTA CGGTGCAGCC ACGGAGTACG GTGCGGATGG TGCGATCGAT
CTGGTGATTA TGGATCCGCC CAGGAGTGGC GCCTATGATG TGGCCCGCGA ACTGGTGACC
GTGCGTCCTG CAAGAATCCT GTATGTTTCG TGCGATCCCC CAACACTCGT CCGGGATCTG
CTGCCGTTGC TGCACAACGG TTATCGGTTG GTGTGGTCAC GCCCCTTCGA CTTGTTCCCG
CACACGCATC ATACCGAAAG CATTACCTTT CTGGAGAGAG TTTGA
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| Protein sequence | MANMSDYIDD LHIESLAYGG SGVGRYAGKV VFVPLTVPGD HVQCRIVRQK KRYIEARAER
VLVASEHRIA PACPAFGQCG GCQWLHLPYA EQCHWKETIF RDFLVRKLDV DSELVRPIVP
SPQQWGYRSR VQLKCLNTPK GFLVGFYRRG SHYVIPVDHC PILHPLLNQA KDLLRSWIEN
TRWSQFVSQI DLAVDDQERV RAVVHCLAND VDDFVTHLKP GALSANMGLF VQTGRKHNLQ
HVCGPVELLI EVDTPELRLG YGPGGFAQIN LPQNRAMVRE VVGTLVSNPP GRVLDLFCGM
GNFSLPVARL AQEVVGVEAY LQSIEMARLN ARLNEIENVS FFAREAYGAA TEYGADGAID
LVIMDPPRSG AYDVARELVT VRPARILYVS CDPPTLVRDL LPLLHNGYRL VWSRPFDLFP
HTHHTESITF LERV
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