Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1550 |
Symbol | |
ID | 3724249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1815194 |
End bp | 1815928 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637751145 |
Product | RNA methyltransferase |
Protein accession | YP_356965 |
Protein GI | 77919150 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.0671761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTCG CTCATATCTG TGTGGTTCTC GTTGAACCCC AGGGGCCGCT TAATATAGGT TCCGTTTGTC GGGCCATGAT GAATTTCGGG TTTTCCGATT TGCGTCTGGT AAACCCTGTG GCGGATCATT TGTGCGATGA TGCCCGGCGT ATGGCGGTCA AGGCGTCGGG GATTTTGGAA GGGGCGCGTC TGTTTCCCGA TTTGCCCTCT GCGCTGGCGG ATTGTAATCT TGCGTATGGC ACAACGCGAC GGTTTGGTAA ATATCGCGAG GATTTTCTGC ATCCGGACGA TGCTGCCCGG GAATTCATCC CCGCTACCCA GGGTGGCAGG GTAGCTTGGG TTTTTGGGCG GGAGGACAAA GGGCTGGAGA CTTCGGAACT CGATCTCTGT CAGCGCTTTG TAACTATTCC TACGGACGAT GCCTGTCCTT CCATGAATCT GGCCCAGTCC GTATCGATCT GTCTTTACGA GACGTCGCGT GTTGCTGCGA TAGCATGTGG CAAGACGGCG GGCAGGAAAT CGACATCGTC CATAGCTACC CTGGAAGCCA TGTACCGACA CATGCGGGAT ACGCTTACCG ATATCGGTTT TCTCGACCCT CAGAATCCGG ATCATATTTT GCGCAGCTTC CGCAGGATTT TCGGCCGGGC CGGGCTCAAT GATCGGGAGG TGCGTATCTT GAGAGGGCTC TGGAGTCGTC TGGACTGGCT CAACGGGCAG CGTCGGGAAG AGTGA
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Protein sequence | MNFAHICVVL VEPQGPLNIG SVCRAMMNFG FSDLRLVNPV ADHLCDDARR MAVKASGILE GARLFPDLPS ALADCNLAYG TTRRFGKYRE DFLHPDDAAR EFIPATQGGR VAWVFGREDK GLETSELDLC QRFVTIPTDD ACPSMNLAQS VSICLYETSR VAAIACGKTA GRKSTSSIAT LEAMYRHMRD TLTDIGFLDP QNPDHILRSF RRIFGRAGLN DREVRILRGL WSRLDWLNGQ RREE
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