| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1541 |
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| Symbol | |
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| ID | 3724240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1806660 |
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| End bp | 1808969 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637751136 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_356956 |
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| Protein GI | 77919141 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGGG TCGGTTTCGC TCTTCTTTTA TTGATGTTTT CCTGGGCACC GTGCTCCGGG
TTTTTTAATG TCTGGTGGTC CGACTTTTTT GTTTGCCTGT TTCCTTTCAT CGCGCTGTTG
CTGCTGATAT ATGAGCATCG GCATGATACT TCGGGTATTC GTCTTCCTGA AGGTTCCAAC
GCTCTTTTGG TCCTTGCAGT CTTCGGCCTG ATCCAACTTG TACCGATCCC GCCGCAATTG
CTGCGTCTTT TGTCTCCAAA TGCCTGGGAG ATCTATCAGC AAACCGTCGG TATATTGCAG
GGGGAGAGCT GGTTGCCTCT GACCCTGGCC CCCAGGGCAA CGCTGGGTAG TCTTTTTCTC
CTGATTGCCT GCTGGGCTGC TTATACCGTC ACCGCCAATC TTCTGGCTCA ACGCAAACAA
TTGAAAGTGG TGGCGGGGGT TCTCGCCTCT ATTGGCGGGG GACTTGCCGG AGGTATTCTT
GTTTTATGGG TTATGAATGC CGTTTTTGGG TTTCTCCCGA GTCGCAATGG CATTCAGCTG
GTTCTTTCCC CCCAGCATGC GGCTATAGTG ACAACCTTCA TGCTGATGAT TTGTCCATTG
TCGCTGTCGC TTTTCCTGAC GGACAGGCCT TCGGTTCGTT ACGGAACCTG GAAAGAGCGT
TTGAGTGAAT TTTTCGTCAC TTTCGGGCAG CGTCGGTATT TTATTTACGG ACTTCCGGCC
ATCGCAATCC CCCTGGCTGT GGCAACCTAT TGGCGAGAAG GGTTGATGGT TCTTTTTATT
GCCATTTTGT TGATGCTGAT ATTTTTAGGA TTGCGCAGTC GTGGCCGTCG GGAAAGTCCG
TATTTGTTTA TTTACCTGTT CATGATATTG ATACTGGCCA TTTCTTTACC ATTGGCCGGT
TCGGTTCAAC CTGACCCGGT ACGAACCGCT GCCGTGCAGG GAAAAGCATT CCCGGAGCCT
CTTGTTTCCC GGCAGGTCGT CTCTGATTTT GCTTTAACCG GTGCGGGCTT CGGTTCTTTT
TCCGCTATCA GTAAGCGTTA CAGACAGCCA TCGGAACCCC ATGTCACTCA TGGCGCATCG
GTTCAGCGTA TCTTTCGTCT GGCAAGTCAA TCGGGGCTGA TCGGTTTCGG ATTGGCGGGA
TGGTTTTTAT TTGTTTTTAT CCGTCGGACC TTTCGCAAAT GGTTGCAGCG ACGACAGAAA
CTTTCCGTTT ATCTGTATGC TGCAGGCATG GGAAGCCTAT TTGTTTTTAT CCTTGGTTAC
TTTTCAACCG GTGGGCTGAG TTTCAATGGT TTTTTCATAC TGCTATTCAT GTTCTTCGGC
GTACTTGCTG CGGCTACGGA ATCTTCGGTA CAAGCCACAG CTCCGGATAA ACCTCATCGT
TTAAGATGGG TGCTGACGAG TGCTTTAACC ATTCTGGCTG TTTTATTGTC CGGCTATTTT
TACATCGGGG ATCCGGTTGG ACAAAAATTA TATTCCGCAG CGCGGAATTC GGCCTCCGAG
GCCACCGAAG CACGCGAAAC TTCCCGTGAC CTGATAGCGT TGGCTTCTTT TTTCGATCCT
TTGAACCCCC GGTATCGGTA TGTCCGGGGA TATCAGGCCA TGGATATGAA TGACGAGCAT
GGCGCCCTGA AACATTTTGC CGACGGTATG CGTCTGGACC CTCTCGGCGG TCGATCCCTG
TATGGGTTGG GACAGTACTT TTTCAACGCT GGAAATAGCG TTGTCGCAGA AAACCTGATC
CTTGCCGCAC TGGACAGCGA CCCGTCATCG CGTGAGTTTC AGTCCGGTTA TGTTGAGCAG
TTGGTGAACA CTCAAAAACA AACAGAGGCG CTGTCGTTGA TTCGTGGTTT TATAGAGTCG
TCCCCCGAAG ATACCCTGTT CTGGGTTCAG CAGGTAATCA ATTATGGGAT CGACGGTTCG
CATAGATCTG AAATCCTTCC GGATCTTTCC AGAAGTCATC ATGACTACGG CTTATATCTT
ATGCAACATG GTGATATCAA CAAAGCGGAT GGCGCTTTTC GCAAGGCGCT TGCATTGGCC
AGACAGGAGC AGTATCCCGA CAAGTCGATT TTTTTGCCCA TGGCGCATTT TTTTGAACGG
TATCAGGGAT ACGACGATGC CCTGGACACG CTGATGGTGG CAAGTTCCAA GTATCCCCAG
GATCTCAATT TTCTGCTGGC GAAAGGGAGA ATTTATCAGG AAATGGGTAT TACCTTCAAG
GCCCGGAAAG TGTACCAGGA CGTGCTTATT CTCAATCCGA CTAACCAGGA AGCCCGACAA
AGACTGAATC TGCTCGAGGG GGTACTGTAA
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| Protein sequence | MNRVGFALLL LMFSWAPCSG FFNVWWSDFF VCLFPFIALL LLIYEHRHDT SGIRLPEGSN
ALLVLAVFGL IQLVPIPPQL LRLLSPNAWE IYQQTVGILQ GESWLPLTLA PRATLGSLFL
LIACWAAYTV TANLLAQRKQ LKVVAGVLAS IGGGLAGGIL VLWVMNAVFG FLPSRNGIQL
VLSPQHAAIV TTFMLMICPL SLSLFLTDRP SVRYGTWKER LSEFFVTFGQ RRYFIYGLPA
IAIPLAVATY WREGLMVLFI AILLMLIFLG LRSRGRRESP YLFIYLFMIL ILAISLPLAG
SVQPDPVRTA AVQGKAFPEP LVSRQVVSDF ALTGAGFGSF SAISKRYRQP SEPHVTHGAS
VQRIFRLASQ SGLIGFGLAG WFLFVFIRRT FRKWLQRRQK LSVYLYAAGM GSLFVFILGY
FSTGGLSFNG FFILLFMFFG VLAAATESSV QATAPDKPHR LRWVLTSALT ILAVLLSGYF
YIGDPVGQKL YSAARNSASE ATEARETSRD LIALASFFDP LNPRYRYVRG YQAMDMNDEH
GALKHFADGM RLDPLGGRSL YGLGQYFFNA GNSVVAENLI LAALDSDPSS REFQSGYVEQ
LVNTQKQTEA LSLIRGFIES SPEDTLFWVQ QVINYGIDGS HRSEILPDLS RSHHDYGLYL
MQHGDINKAD GAFRKALALA RQEQYPDKSI FLPMAHFFER YQGYDDALDT LMVASSKYPQ
DLNFLLAKGR IYQEMGITFK ARKVYQDVLI LNPTNQEARQ RLNLLEGVL
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