Gene Pcar_1536 details

Gene Information

• Locus tag: Pcar_1536
• ID: 3724235
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1799373
• End bp: 1801316
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637751131
• Product: polysaccharide biosynthesis protein
• Protein accession: YP_356951
• Protein GI: 77919136
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1086] Predicted nucleoside-diphosphate sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: 56
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAGG AGACTGCAGC AAGAACCCCC CGAAATCCGG TTTTCTATAA CAGGGTCCGC 
AAAACCCTGA TCCTCTTTTT TCATCTCCTG GTAGCATCCT TTTCACTGCT CCTTGCTTTC 
TCCCTACGTT ACGATTTGCA GATCCCAACT GAATTATGGC CATCCATTCT GGAGATGCTG 
CCTGTCGTGT TGCTGTTGAA ACTCGTGGTT TTTCGCACCA TGGGGATGGC TGATGGTTGG 
TGGCGTTACG TTTCGATTCC GGATTTGCTG CAGATTTTAA AAGCCAATGT GGTGGCGTCT 
TTCGGGGTGG TGCTGTATGC CGTATTCATC AGGGAAATGA ATAACCTGCC GCGATCGGTC 
ATTATTCTCG ACTTTCTGGT TTGTTTCATG ACCATGATCG GCGTGCGGGT TTTGGTCCGT 
ATTCTCCGGG AGCAAAGGCG ACAACTCACC AAAAGTTATC GTCGGAAGAA AAAAAGTGTT 
CTGGTCGTTG GTTCCGGCAT TGTCGCCCAG ACCATAGTGA GGGAAATGCG GGAGAATCCC 
AAAATGCTCA AGGCGGTACT GGGATTTATT GATCGCGACC AGGGACGCAA GGGGAAGGTT 
TTCAATGGCA TACCGGTACT CGGAACCTTG GACGATATGG CCAAAATCTG CGGTAAAAAT 
GATATCGATC TGATTATTGT TGCCGAGTCG TCGGTTCAGC CTAAGGAATT GCGAAATATT 
GTGGCGTTTT GCAAGGAAAA CAAGATTGAA TCGAAGATAC TTCCGGCAAT GGGGGATATC 
ATTTCCGGTC AGGTATCTCT GCAACACTGT CGGGAAGTCC GTCTTGAAGA TCTTTTGGGA 
CGGCCACCGA TTCGTTTGGA TGTCGAGGAA ATCAACAACT ATCTGCATGG TAAACGTGTG 
TTGGTCACCG GCGCTGCCGG AAGTATCGGC AGTGAGATCT GTCGCCAGGT AGCTCAGTTC 
GGTCCGGGAA ATCTGGTGAT GTTCGAAAAC GCAGAGACTC CGCTTTTCCA CCTGGAAAAC 
GAGCTGCGGG AAAAATTCCC CGGTTTATCG CTTATTCCCA GCCTCAGTGA CATCCGGGAT 
CAGACCCGCG TATCTCAGGT ATTTAAAAAA CACCGACCTC AGGTGGTTTT TCATGCCGCG 
GCTTACAAGC ACGTACCTAT GTCGGAAATC AATCCGGTTC AAGTGGTTAA AAATAACGTT 
CTGGGAACAC GCAATATCAT CGACGCCAGT TTCGATATCG GTGCGGAACA CTTTGTTCTG 
ATTTCCACCG ACAAGGCGGT CAACCCGACC AATATCATGG GTACAACCAA GCGGGTTGCC 
GAGATGTACG CTCAGAGTCT GCCGCGTAAC GGTTCCACCA AGGCTACCAC TGTTCGGTTC 
GGTAATGTGC TGGGCAGCCA CGGCAGTGTC ATTCCCATTT TCCGGGAGCA AATATTGAAA 
GGTGGCCCGG TTACCGTAAC TCATCCGGAG ATAACACGCT TTTTCATGAC CATCCCGGAA 
GCCGTGCAGC TGGTACTCCA GGCGGGGTGC ATGGGATACG GAGGGGAAAT TTTCCTCCTC 
GATATGGGCG AACCGGTAAA AATCATCCGC CTGGCGGAAG AAATGATCCG TCTTTCAGGG 
CGAAGGCCTT ATGAGGATAT TGAAATCACC TTTACGGGGT TGCGGGCAGG TGAAAAGTTG 
TTTGAGGAGT TGCTGATCGA CGGCGAAGGG ATCAAGCCGA CGGTACATGA AAAAATCCGC 
GTACTGGAAG CGACCAGCTC TTCCTGCGGG TTGGTCAAGG AAGAAACCGA GTTGCTGTTC 
GAGGCGATCC GGCGCGGCGA TCAGGTAGAA CTTATCCGAC TTCTTAAAAA CATGGTGCCG 
GAATTCCACA CAACTCAGAA TTTGGTGCAT TCGGAATCCA AGCCTGGAGA AGGGACAGGA 
AAGGGTATTA ATTTATCCAA CTAA 

 

Protein sequence

MPKETAARTP RNPVFYNRVR KTLILFFHLL VASFSLLLAF SLRYDLQIPT ELWPSILEML 
PVVLLLKLVV FRTMGMADGW WRYVSIPDLL QILKANVVAS FGVVLYAVFI REMNNLPRSV 
IILDFLVCFM TMIGVRVLVR ILREQRRQLT KSYRRKKKSV LVVGSGIVAQ TIVREMRENP 
KMLKAVLGFI DRDQGRKGKV FNGIPVLGTL DDMAKICGKN DIDLIIVAES SVQPKELRNI 
VAFCKENKIE SKILPAMGDI ISGQVSLQHC REVRLEDLLG RPPIRLDVEE INNYLHGKRV 
LVTGAAGSIG SEICRQVAQF GPGNLVMFEN AETPLFHLEN ELREKFPGLS LIPSLSDIRD 
QTRVSQVFKK HRPQVVFHAA AYKHVPMSEI NPVQVVKNNV LGTRNIIDAS FDIGAEHFVL 
ISTDKAVNPT NIMGTTKRVA EMYAQSLPRN GSTKATTVRF GNVLGSHGSV IPIFREQILK 
GGPVTVTHPE ITRFFMTIPE AVQLVLQAGC MGYGGEIFLL DMGEPVKIIR LAEEMIRLSG 
RRPYEDIEIT FTGLRAGEKL FEELLIDGEG IKPTVHEKIR VLEATSSSCG LVKEETELLF 
EAIRRGDQVE LIRLLKNMVP EFHTTQNLVH SESKPGEGTG KGINLSN