Gene Pcar_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1521 
Symbol 
ID3724220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp1782961 
End bp1783638 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content42% 
IMG OID637751117 
Productphosphoesterase 
Protein accessionYP_356937 
Protein GI77919122 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCG GCATCATATC GGATTTACAC GCAAACCCGT TTGCCCTTGA ATCAGCGATA 
GAATATTTTA AATCAAAAAA TGTCGAAAAA GTTCTTTGTG CCGGGGATAT TGTTGGATAC 
AGCCCTCTTG TCAATGAGAC GATTGATTTT GTAAAGAAAC ACAACATTGA ATCTATCATT 
GGAAATCATG ATTATTATGT TATGACAGGA TGTCCGGAAA AAAAAAGTTG TTTAGTAAGA 
GAATGCATCG CCCGGACAAA AGCTATAATC AGTGGTGAAA ATCTAAAATT CCTATGGTCT 
TTGCCTAAAC AAAAGTTTGT GGATCTTGAA GGTCATCGCA TAAAAATTGT TCATGGTAGT 
CCTTTTAATC TTCTGGAAGA GTACATTTAT CCTGACAAGC AGTTCAATCC GGTTGATTAT 
CGGTTAGATG ACGAAGACTT ACTGATATTG GGGCACACTC ATCATCAGAT GGTGAAAGAG 
GTGTCGGCTT TCAGCATGGT CAATCCGGGC TCCATCGGCC AACCCCGGGA TGCTTACGGA 
TTCGCCTGCT TTGCCATCTA CGATAGTTCG ACAAGGGACA TTCGTCTGAG CAGGCTGGAA 
TACGACACCA CCCGTATGAT TCGCGCTATT GAAAAAGCAG GTTGGCCGGC GATTCTGATG 
AAATATTTTT GCAGGTGA
 
Protein sequence
MQIGIISDLH ANPFALESAI EYFKSKNVEK VLCAGDIVGY SPLVNETIDF VKKHNIESII 
GNHDYYVMTG CPEKKSCLVR ECIARTKAII SGENLKFLWS LPKQKFVDLE GHRIKIVHGS 
PFNLLEEYIY PDKQFNPVDY RLDDEDLLIL GHTHHQMVKE VSAFSMVNPG SIGQPRDAYG 
FACFAIYDSS TRDIRLSRLE YDTTRMIRAI EKAGWPAILM KYFCR