| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1517 |
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| Symbol | |
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| ID | 3724216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1778144 |
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| End bp | 1779496 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637751113 |
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| Product | pectate lyase |
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| Protein accession | YP_356933 |
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| Protein GI | 77919118 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.188237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGTA ATCTTTTTCT CTACATCTGG ATGTCGTTTG CCATGGTCGT TATGTGCTGC
ATGTTAACTA CCTGCAGTTA TTACCAAATC TCCCCGCAGC GGGGTGAGTT GAAAATTTAC
CCTGGTGCCG AAGGCTATGG TACCGAAACG CCTGGCGGTC GAGGCGGTCA GATCATTAAG
GTCACCAATC TTAACGACAG CGGTACGGGA TCTTTGCGTG CCGCCATACA GGCCAGCGGT
GCCCGAATCG TGGTGTTTGA AGTCTCCGGC ATCATTGAGC TGCAGAGCGA GCTGATCATT
ACCAACCCCT ATATCACCAT CGCCGGTCAG ACCGCTCCGG CTCCGGGCAT CATGTTGAAA
AACCGGCGGC TTAAAGTATC CGCCCATGAT GTGGTGATTC AGCATATCCG CGTACGTCCG
GGCGATGAGC GCTCCTACAA CACTTCCGAA GAAGGGGAAC GGGATTGCCT GGGGATCGTC
GGTCATTCGG ATATCTACAA CGTTGTCGTT GACCATTGTT CCTTTCAGTG GGCGGTCGAC
GAGGTCATCG GGCTGTGGGG ATATAGCAAC AGTCGACTGG ACAACATCAC CATTTCCAAC
TGCATTGTCA GCGAAGGTCT GGATAACTCG ATTCACCCCA AAGGCGCCCA CTCCAAAGGG
TTCCTCATCG GTGACTATGC CAAGAAGGTA ACCGTGTTGC GCAATCTGAT TTCCTCGAGC
GACGACCGCA ACGGTCCGAA CGCCAAGGGT GGCACCACCT CGGTGGTGAT CAATAACTAC
GTGTACAATG CCGGCCGCAG CGGTCGCATG CACTACAGCG ATTCCTATGG TGCCGGGCCG
CTGTTCCAAT CGACCGTCGG CAATGTTTTC CGGGATGGTC CGGAGTATGC GACCCAGGCT
CCGCTGTGGT GGGCCGACAA TACCAAATCC GGTTCGCAGG TTTACGCCTC CGATAACCTC
ATACAGCGCC TTGACGAGTC GGTGGCTTCC GTACCGCTGA TGGATCCTCC GTCCTGGGGC
AATCCGCAGG TGTCGACGCC GCCGGTGCCC TACGACAACG TCACCATCCT TCCGACGGAC
AGCGTTAAAA GTTATGTGCT GAAAAACAGC GGCGCACGGC CGGCAGAGCG CTGGACGACC
TACGGCGACA GAATCGACGA GCGAGTCATA AGTGACGTCT GGAACGGCAG CGGGGCCATG
ATCGACACCC CTGCTCAGGG CGGCGGTTGG CCGACGTATG CCCAGAACAC CCGGCAGTTT
GTCGCGCCTG GCAATCCCAA CGGCGACGAC GACGGTGACG GCTACACCAA TATCGAGGAA
GTATTGCATC AGATGGCTGC ATCTGTCGAA TAA
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| Protein sequence | MARNLFLYIW MSFAMVVMCC MLTTCSYYQI SPQRGELKIY PGAEGYGTET PGGRGGQIIK
VTNLNDSGTG SLRAAIQASG ARIVVFEVSG IIELQSELII TNPYITIAGQ TAPAPGIMLK
NRRLKVSAHD VVIQHIRVRP GDERSYNTSE EGERDCLGIV GHSDIYNVVV DHCSFQWAVD
EVIGLWGYSN SRLDNITISN CIVSEGLDNS IHPKGAHSKG FLIGDYAKKV TVLRNLISSS
DDRNGPNAKG GTTSVVINNY VYNAGRSGRM HYSDSYGAGP LFQSTVGNVF RDGPEYATQA
PLWWADNTKS GSQVYASDNL IQRLDESVAS VPLMDPPSWG NPQVSTPPVP YDNVTILPTD
SVKSYVLKNS GARPAERWTT YGDRIDERVI SDVWNGSGAM IDTPAQGGGW PTYAQNTRQF
VAPGNPNGDD DGDGYTNIEE VLHQMAASVE
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