| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1509 |
|---|
| Symbol | |
|---|
| ID | 3723773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1763100 |
|---|
| End bp | 1764044 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637751105 |
|---|
| Product | putative transport system permease protein |
|---|
| Protein accession | YP_356925 |
|---|
| Protein GI | 77919110 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000000000073133 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAATC TTTCCCAACG TAAAATCCGT GCAGCGCGCA TTTCCATGGC CACAGCCACA
GGCCTGACCT TGCTGAAACT GGTTACCGGT TTCCTCACCG GTTCGATGGC TGTGCTGTCT
TCCGCCATCG ATTCGTTGCT CGACATCGTG ATGTCGGTGG CCAACTTCCT GGCTATACGC
CAGGCGGAAC AACCGCCCGA CCCCAAACAC CCCTTCGGGC ACGGCAAATT CGAAACTCTG
GCAACCATCG TGCAGGCCCT GGCCATTGGC CTGTCCGGCG GATGGGTCTG CTATGAATCG
GGGCGCCGAC TCTTGACAGG TATCACCCTC GGTCATCTGG AAGGCGGCAT GGCCGTACTG
GCATTCAGTG CCGTGGTTTC GTGGCAGATC GGACGCTTTC TTATCCGCAC CGCTCGCGAA
ACGGAATCAA CCGCCCTTAA GGCCGATTCC CTTCACTTCA CCATGGATGT CTATACCAAT
CTCGCTCTGC TGGTCGGCCT TTTCGCCATC CGCCTGTTCC ATATCGCCTG GCTTGATCCC
GTGCTGTCCA TCGTCGTAGC GCTGTATATT TTCTATCAGG CCTTCGGTCT GTTCCGTTTC
GGGCTGCAGG ATATTCTGGA TGAACGCTTG CCTGAAACGA TTCGTGAAGA AATCGCCACT
ATCCTCGAAC AGCATCGCGG TAAACTGCTG GGCTACCATC GGCTTCGTAC TCGGAGAGCC
GGGTCTCAGA AAATCATCGA TTTCCACCTC ACCCTCTGCA AGCACTTGTC GGTGGGAGAG
GCCCATGACA TCGCCGACCA TCTGGAAAAA CACATGAAGG ACCGCATCGG GCGCGCCGAC
ATCACCATCC ATGTCGAACC GTGCCCTTAT CCGACATGCC CCGGCCGCAA CAAATGCCCC
GGCGATTTCC CCCTTGGCAA AGATGAGTCC GCAAATAAAA AATAA
|
|---|
| Protein sequence | MQNLSQRKIR AARISMATAT GLTLLKLVTG FLTGSMAVLS SAIDSLLDIV MSVANFLAIR
QAEQPPDPKH PFGHGKFETL ATIVQALAIG LSGGWVCYES GRRLLTGITL GHLEGGMAVL
AFSAVVSWQI GRFLIRTARE TESTALKADS LHFTMDVYTN LALLVGLFAI RLFHIAWLDP
VLSIVVALYI FYQAFGLFRF GLQDILDERL PETIREEIAT ILEQHRGKLL GYHRLRTRRA
GSQKIIDFHL TLCKHLSVGE AHDIADHLEK HMKDRIGRAD ITIHVEPCPY PTCPGRNKCP
GDFPLGKDES ANKK
|
|---|
| |