Gene Pcar_1504 details

Gene Information

• Locus tag: Pcar_1504
• ID: 3723768
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1759206
• End bp: 1759703
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637751100
• Product: HIT (HINT, histidine triad) family protein
• Protein accession: YP_356920
• Protein GI: 77919105
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000000000000163027
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCATT TATGGGCGCC ATGGCGCATG ACTTACTTGG AATGTAAGGA CCGGCAAGCC 
AAAGACTGTT GCGTTTTTTG TGTGCGCGAT ATTCAAGGGG AGGATGCGCA ACGGTTAATT 
CTATGGCGGG GCGAGCATGT ATTTGTGGTT ATGAACAAGT ATCCCTATAC CAACGGGCAC 
CTTCTTATCG CTCCTTATCG ACATGTTCCG GATATTCTTG ATCTTGAATC TGCGGAGGAA 
GTGGAGATGT TCCAGTTGCT GCGTAAGTGC CGCAGGGTCT TGCAGGAATG TCTCAAGCCT 
CACGGGTTCA ATATCGGTAT CAACATCGGC AAGATTGCCG GTGCGGGCCT GGCGGATCAC 
CTGCATATGC ACATCGTGCC GCGATGGACC GGCGATACCA ATTTTATGCC GGTGTTTGCC 
GATGTGCATG TTGTGCCCCA GCACCTTGAG GAAACCTATG CTATCCTCCT GAACGGCTTT 
AATGCCCTCG ACACCTGA 

 

Protein sequence

MKHLWAPWRM TYLECKDRQA KDCCVFCVRD IQGEDAQRLI LWRGEHVFVV MNKYPYTNGH 
LLIAPYRHVP DILDLESAEE VEMFQLLRKC RRVLQECLKP HGFNIGINIG KIAGAGLADH 
LHMHIVPRWT GDTNFMPVFA DVHVVPQHLE ETYAILLNGF NALDT