Gene Pcar_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1475 
Symbol 
ID3723808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1722162 
End bp1723091 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content52% 
IMG OID637751068 
Productmetalloendopeptidase-like membrane protein 
Protein accessionYP_356891 
Protein GI77919076 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGT GGTTCAAAAT CCTTCTTCCT CTCATACTGG TTTTTCTTTG CGCCGTGAGT 
GCTTCGGCGG AAAAACTGTA TAAATCCCGT AGTGAGGGCG GCACCCTGGT GTTTTCCGAT
AGACCTGTAG CCAATACGCA GGTGTTGGAT GTGAAGCAAG TCGAGGTTGC TAAAAAGGCT
TGTTTCGATA TTTCCAAACG GGGTAGCAAG GAAAATCTGC AGCTTTATGG GGTTAACGAC
TGTTATGGGC CGGTAGAGTT TTCGTTTACT ATGAATGAGG GCGAAAACGT TGCATGGGAT
CGCTCCAAAA GGTTCAAGGT TGTTGTCCCT GCCAGAAAGA GTCAGCCGCT GGTGCATGTT
TGGCAGGCCA ATAAACGCAA AGGGTTTAAA TACACCTACA CCACCGAATT TGTCTCCGGT
GATCCCGCGG CAAGGCACTC TCCTCATAGA CCTTATCTGT TTCCCGTCCC AGCCGGCAGG
GGGTTCCGTA TAACGCAAGG ATTTCACGGC AAGGCGACCC ATACCCATCC TCAGAGTATT
TATGCCGTCG ATATCGCGAT GCCGGAGGGA ACGAGAGTAT GTGCCGCCAG GGGCGGGGTG
ATCATGGAAG TCGCCAACGA TTTTTTCACC GGCGGGAAAG GCGCCGCTTT TGCCGAAAAA
GCGAATTTTA TCCGGATTCT ACACGATGAC GGAACCATGG CGCTTTATGC CCATCTGAAA
CTGGAGTCCA TTCAATATTC ATCGGGAACG CGGGTTGAGC GCGGACAATT CATCGGTGAA
TCGGGCAATA CGGGATATTC GTCCGGTCCC CATCTGCATT TTGTCATCCA GAAAAACGCC
GGCATGGAGC TTCGCTCGAT CCCCTTCGAA TTTGCGGACG GCCGGGGAAG GGGCTTCACT
CCGGCGGCAG GGATGGTGGT TAGGCGTTAA
 
Protein sequence
MNKWFKILLP LILVFLCAVS ASAEKLYKSR SEGGTLVFSD RPVANTQVLD VKQVEVAKKA 
CFDISKRGSK ENLQLYGVND CYGPVEFSFT MNEGENVAWD RSKRFKVVVP ARKSQPLVHV
WQANKRKGFK YTYTTEFVSG DPAARHSPHR PYLFPVPAGR GFRITQGFHG KATHTHPQSI
YAVDIAMPEG TRVCAARGGV IMEVANDFFT GGKGAAFAEK ANFIRILHDD GTMALYAHLK
LESIQYSSGT RVERGQFIGE SGNTGYSSGP HLHFVIQKNA GMELRSIPFE FADGRGRGFT
PAAGMVVRR