| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1457 |
|---|
| Symbol | |
|---|
| ID | 3723829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1701564 |
|---|
| End bp | 1702130 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637751050 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_356873 |
|---|
| Protein GI | 77919058 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 2.96188e-20 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAAAAA CACTCATCGG TAAAAAATTA AAAACCACAC GCCTCGGCAA AGGATTGACG
ATCCAGGGTT TGACCAACCT TTCGGGCGTC TCAGCCAATA TGATATCCCG CATCGAGCGC
GGGCTTACAG TGCCTTCGGT AAAAATCCTG ATGAAACTGG CCTCAGCCCT GGGTATGAGT
ATCGGCTACT TTGTCGAAGA AGCGGAAAAA AGCTCGACAG TCATCCTCAC CAGAAAGGGA
CAAGGGGAGC CACTGTTCTT TTACAAAGAC AAACAGCAGA TCAGCAGCCT GACTCAGGGG
CTGCAGGATC CAAGTTTCAC CGTATTGCAC GATACCCTGG AAAAAAACTG CAACAGCGGC
GACGCCCCGA TGGTTCACAC GGGCGAGGAA TTCGTCATGG TTTTAAAGGG ACGTCTTGAA
TTTATCATTC AGGACGAAAA GTATATTCTC GAAAGCGGTG ATTCCTTATC TTTCAAGGCA
TCGTTACCAC ACCTGTGGCG AAATCTTGAA AACGGCCCCA CGGAAGTCCT CTGGGTCGTA
TCGCCCGCCC CCAATATCGC TCAGTAA
|
|---|
| Protein sequence | MIKTLIGKKL KTTRLGKGLT IQGLTNLSGV SANMISRIER GLTVPSVKIL MKLASALGMS
IGYFVEEAEK SSTVILTRKG QGEPLFFYKD KQQISSLTQG LQDPSFTVLH DTLEKNCNSG
DAPMVHTGEE FVMVLKGRLE FIIQDEKYIL ESGDSLSFKA SLPHLWRNLE NGPTEVLWVV
SPAPNIAQ
|
|---|
| |