| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1454 |
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| Symbol | |
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| ID | 3723826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1698631 |
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| End bp | 1700331 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751047 |
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| Product | RNA-binding protein |
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| Protein accession | YP_356870 |
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| Protein GI | 77919055 |
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| COG category | [K] Transcription |
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| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000000048196 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCAA GTACAGGATT GTCTCATCGG TCAACAATTG GTATGGACGT ATTTTATATC
GAAGCTGTTG TGGATCAGTT GCAATCGCTG GTTACGGGGG CGTCGGTAAA AAAAATCCAT
CAGCCAGATG CCGATACCAT TATCCTGCGT CTTTGGAACG GGCGGCGAGA GTTGCGCTTG
CGTATTTCCG CGACCGTTGG TGCCACCGGT TTGTATCTTA CCGAACGCAC CTGGATAAAT
CCGGCAAATC CCTTACGCTT TTGTCAACTG CTGCGGGCCA GGTTGAGCAG GCTGCGGTCG
GTTCGTCAAC TCTTCGGGGA GCGGATCGTT GTATTTACCT TCGACGGCCA GGATGATTCA
ACTTACCAGC TCATAGCTGA GCTATATGGC AGGCGGCCGA ATATTATTCT GTGCGACGCG
GATGACAAAA TCGTTGATGT TTTGCATCGC AGGGAAGGGG GATCTGAACA CCAGACCTAC
ATGAAGGGGG CTGTTTGGAC CAGACCGGAA AAGGTTCATA AATGGGCTCT GCAGGATGTG
GCTGACTGTT CCGAAATGGC ACCGGTGGAC GACGCGCTTG CCGCGTGGCT GCAGCGCAAT
ATACGCCCGA TGACGCCTGT GGTGGCACGA GATCTCGTCG GCCGTATGTT GCGGAAGGAG
ACGGCTGCCG AGGTGCTCGG AAGTTTTGCC CGACGCTGGC AGGAACACGA CTATAGTTTT
CAGATCGCTC AACTGGAAGG TAGCCCCAGG CTTTTCGTCT TTTGTCCGAG TACCCTTTCG
CTGAGTTCAG TCCGCACCTT CTCGTCTGCT TCAGAGGCGG CGGATTGCTT TTTTGACGAT
TACGCCATGC CGGGGCGGGG TGAAGAGCGG TCCCGGTTGG AGAAGGTTGT CCGGAAAGCC
CTGGCGCGGG TTGAGAAACG GTTACAGCGA TTGCGCCAGG AAGCGGCCAA CACCGATGAT
GCCGACCGAT ACCAACAGCT CGGGCAGTTG TTGATGTCCA ATCTCTTCCG TGTAAGTAAG
GGCATGGCGG AGATAGAAGT CGAAAACTTT TTCGATGAGG GTGGCGTGGT GACCATTCCA
CTCGATCCGG CTCTTTCGCC ATCGGAAAAC GCCGATCGCT TATTTAATAG GAGTAAGAAA
ATACGGCGCG GTTATATCCA CGTGCATCGG AGGATTGAGG AAAGTCATGC AGAAAAGGAC
TGGCTCGAAG CTCTTATGTT AAATCTCAGC GAGGTTACCT CGAATGAGGA GTTGGCGATG
GTGGAAGAAG AAATGCGAGA ATTCCGACTG TTGCCGCGAA AAGCCGATAG GCAAAAAAAA
CGCCCTGTGT CGAGGCGCCC CAAGCTGCGA GAAGCCGTGT CACCGGGCGG TTTTGTCGTT
CAGTGGGGTA CCAATAATCG CGCCAACGAT TATCTGGTCA AAAACCATTG CGGTTCTCAT
GATCTCTGGT TTCATGCCTT GGATCGGCCC GGATGCCATC TGGTTTTAAA ACGACCCCGG
CGTAGTATCG ATATTCCCGA GGAAGATATC CGTTATGCCG CAGGCCTGGC AGCCGGGCAT
TCCCGGGCCT GTAATGAGGG CGTGGCGGAT GTCATGGTCG CAGAAGGGCA AGCCGTTTAT
AAGCCCAAAG GTGCGTTACC CGGCCTGGTG CAGGTCAAGA AATATCGTAC GGTGCGGGTC
GTGCCGCGTC GCGAACCGTA A
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| Protein sequence | MAASTGLSHR STIGMDVFYI EAVVDQLQSL VTGASVKKIH QPDADTIILR LWNGRRELRL
RISATVGATG LYLTERTWIN PANPLRFCQL LRARLSRLRS VRQLFGERIV VFTFDGQDDS
TYQLIAELYG RRPNIILCDA DDKIVDVLHR REGGSEHQTY MKGAVWTRPE KVHKWALQDV
ADCSEMAPVD DALAAWLQRN IRPMTPVVAR DLVGRMLRKE TAAEVLGSFA RRWQEHDYSF
QIAQLEGSPR LFVFCPSTLS LSSVRTFSSA SEAADCFFDD YAMPGRGEER SRLEKVVRKA
LARVEKRLQR LRQEAANTDD ADRYQQLGQL LMSNLFRVSK GMAEIEVENF FDEGGVVTIP
LDPALSPSEN ADRLFNRSKK IRRGYIHVHR RIEESHAEKD WLEALMLNLS EVTSNEELAM
VEEEMREFRL LPRKADRQKK RPVSRRPKLR EAVSPGGFVV QWGTNNRAND YLVKNHCGSH
DLWFHALDRP GCHLVLKRPR RSIDIPEEDI RYAAGLAAGH SRACNEGVAD VMVAEGQAVY
KPKGALPGLV QVKKYRTVRV VPRREP
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