| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1452 |
|---|
| Symbol | |
|---|
| ID | 3723824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1696682 |
|---|
| End bp | 1697152 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637751045 |
|---|
| Product | putative rRNA methylase |
|---|
| Protein accession | YP_356868 |
|---|
| Protein GI | 77919053 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.00000390375 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA AACCTTTCCA TATCGTTCTG GTCGAACCGG AAATCCCCCC GAATACGGGC
AACATTGCTC GCCTTTGCGG CGCTACCGGC ACAATATTAC ACCTGGTGGG GAAACTCGGT
TTTTCCCTGG ATGACAGATA CCTAAAACGA GCGGGCCTCG ATTATTGGGA GGTGATCGAT
GTTCGCCGAT GGGAATCACT GCAGCAACTT GAAGAAGCCT TCCCTGATGG GCGCTGGTGG
TATACGTCGA AAAAAGCCGA ACGGTCCCAT GTGGGAGCGG ATTTTCAACC GGGAGACTTT
ATCGTTTTCG GCAAGGAAAC CGCAGGATTG CCCGCAGATT TATTGGCCCG AAACCCGGCA
CACTGCATTC GCATACCGAT CTTCTCGCCG CGCGTCCGGA GTCTGAACCT TTCCACCGCT
GCAGGTATCG TGTTGTATGA GGCGTTACGA CAAACCGGCC GCCTTGATTA A
|
|---|
| Protein sequence | MTNKPFHIVL VEPEIPPNTG NIARLCGATG TILHLVGKLG FSLDDRYLKR AGLDYWEVID
VRRWESLQQL EEAFPDGRWW YTSKKAERSH VGADFQPGDF IVFGKETAGL PADLLARNPA
HCIRIPIFSP RVRSLNLSTA AGIVLYEALR QTGRLD
|
|---|
| |