Gene Pcar_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1447 
Symbol 
ID3723819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp1692194 
End bp1693399 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content54% 
IMG OID637751040 
Productputative bifunctional enzyme 3,4-dihydroxy-2-butanone 4-phosphate/GTP cyclohydrolase II 
Protein accessionYP_356863 
Protein GI77919048 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.278166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTGG ATAATATAGA AGCCGCATTG GAAGATATCC GCCAGGGTCG CATGGTGATC 
CTTGTCGACG ATGAGGATCG CGAAAACGAA GGCGACCTGA CCATGGCCGC CGAGATGGTG 
ACTCCCGAGG CGATCAATTT CATGGCCAAG GAAGGGCGTG GCCTTATTTG TCTTTCTCTG 
ACCGAAGAGC GTGCCGACCA TTTGCAACTG CCGCTTATGG TCAGTGAGAA CTCATCTTCC 
TTTGGAACGG CTTTTACCGT ATCCATCGAG GCACGTAAAG GTGTCACTAC CGGAATTTCC 
GCTAAAGATC GGGCTACGAC TATCCAGGTT GCCATTGCCG ATGAAAGCAA GGCTCATGAC 
CTGGCCCGTC CGGGGCACGT TTTTCCGCTG CGCGCCAAAA AGGGCGGGGT GTTGGTACGT 
GCCGGGCAGA CCGAAGGATC TGTGGATCTC GCACGGTTGG CGGGTCTCAA ATCCGCCGGT 
GTTATCTGTG AAATCATGAA TGATGACGGT ACGATGGCGC GTATGCCTGA ACTCGAAAAA 
TTTGCCGAAA AACACAACTT GCGCATCGTC ACCGTGGCTG ATCTGGTGAG TTATCGCATG 
AACAAGGAAA CCTTGGTGCG ACGCGAGGCG GAAACCAATT TGCCGACTCC CTACGGGGGG 
GATTTCACCG CGGTCGGCTA TGAAAATGAC GTAGACAACG CCCAGCACCT GGCCCTGGTC 
AAAGGAGAAA TCGATCCTGA AAAGCCGGTT CTTGTACGCG TCCATTCCGA ATGCCTGACC 
GGTGACGTTT TCGGTTCTTT GCGCTGTGAC TGTGGCGATC AGTTGCATGC CGCCATGTGT 
CAGATCGGCA AGGAGGGAAG CGGTGTCATC GTCTATATGC GGCAGGAAGG CCGTGGCATC 
GGTCTGAATA ACAAGCTGAA AGCCTACGCG CTTCAGGACG GGGGCTGCGA TACGGTCGAG 
GCCAACGAGG CTCTCGGGTT CGAGGACGAC TTGCGCGATT ACGGAATCGG TGCCCAGATT 
TTGGCCGACC TCGGTGTTCG TAAGATCCGC CTGATGACCA ATAATCCTAA AAAAATTGTC 
GGTCTGGAAG GTTATGGCCT CGAGGTGGTG GAGCGCGTGG CCATAGAAAT GCCGGCGACC 
TGCGATAACT TGCGCTATCT TAAAACCAAA CGTGAAAAAA TGGGGCATCT GCTGGAAAAT 
CTTTAG
 
Protein sequence
MSLDNIEAAL EDIRQGRMVI LVDDEDRENE GDLTMAAEMV TPEAINFMAK EGRGLICLSL 
TEERADHLQL PLMVSENSSS FGTAFTVSIE ARKGVTTGIS AKDRATTIQV AIADESKAHD 
LARPGHVFPL RAKKGGVLVR AGQTEGSVDL ARLAGLKSAG VICEIMNDDG TMARMPELEK 
FAEKHNLRIV TVADLVSYRM NKETLVRREA ETNLPTPYGG DFTAVGYEND VDNAQHLALV 
KGEIDPEKPV LVRVHSECLT GDVFGSLRCD CGDQLHAAMC QIGKEGSGVI VYMRQEGRGI 
GLNNKLKAYA LQDGGCDTVE ANEALGFEDD LRDYGIGAQI LADLGVRKIR LMTNNPKKIV 
GLEGYGLEVV ERVAIEMPAT CDNLRYLKTK REKMGHLLEN L