Gene Pcar_1441 details

Gene Information

• Locus tag: Pcar_1441
• Symbol: rpiB
• ID: 3723869
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1687092
• End bp: 1687547
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637751034
• Product: ribose 5-phosphate isomerase B
• Protein accession: YP_356857
• Protein GI: 77919042
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 78
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCCTTA TAGCCAGTGA TCACGGCGGT CTTGAACTGA AAGAACAGGT CAAGGCATAT 
CTTAAGCAAC GTAATATCGA AGTGCGAGAC CTAGGAACCG ATAACGGTGA CTCCGTCGAT 
TACCCCGATT TCGGGGAACG TGTCGGGAGA GCGATTTCCA CAGGTGAAGC CGAAAAAGGC 
ATTCTGATTT GCGGTACCGG CATCGGCATG TCGATCGTTG CGAATAAATT CCCCGGTGTC 
CGCGCAGCCC TGATCTGGGA TGAGTTCACC GCGCGTATGT CCAAGGAACA CAATAATGCC 
AATATTATCG TCATGGGCGG GCGTATGCTC TCCGACGACA AGGCCAGCCA GATGGTCGGG 
GTTTGGCTCG ATGCTACCTT TGAGGGTGGA CGACACCAGA AACGCCTCGA TAAAATAGCG 
CAAATAGAGG AAGATATCAG ATCCGGCCGG CTTTGA 

 

Protein sequence

MFLIASDHGG LELKEQVKAY LKQRNIEVRD LGTDNGDSVD YPDFGERVGR AISTGEAEKG 
ILICGTGIGM SIVANKFPGV RAALIWDEFT ARMSKEHNNA NIIVMGGRML SDDKASQMVG 
VWLDATFEGG RHQKRLDKIA QIEEDIRSGR L