Gene Pcar_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1429 
Symbol 
ID3723856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1676201 
End bp1677040 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content53% 
IMG OID637751021 
Productputative lipoprotein 
Protein accessionYP_356845 
Protein GI77919030 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0000184738 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGGT GTGGATTCAA GGGTCGGAGA CGAAGGGAGC TGTGGCCGGG CAACGTATGG 
CGTGTCGGTC GGACGGTTTT GGTGCTGGCT TTGTTGTGCT GGCTGACGGG TTGCAGTCCG
CCTCGAGGTG TTTACCATAC GGTCAAGCCC GGACAGACAC TCTATCGTAT AGGACGGGCT
TATAATGTCG ATACGGACCG TCTCGCGCGC ATTAACGGCA TTCGGGAGCC TTCGCAACTT
AAAGTCGGCA AGCGGCTTTT TATTCCTGGA GCGCGAAATC CAAAGTATGT CCCTGCTACC
GTTTCAAGTG CGCAACGGAA CCGCCCTCAG AGCACCGTCA AAAAAGCCGC TAAAACGGCA
TCTTCTCCGC GCTCCCGCGC TACGGCAAGT CGGCGTCAAG CCTCAGTTGT CAAACCTTCC
GTTAAAAAAA ACACGCCTGC CCTCAAAAAA ACTCCGGTAA AATCTTCCCT TGTTAAATTT
ATTTGGCCAG TTCGTGGTAA AATGGTTAAG TCGTTTGGAC AACAGGGCTA TGGCGGTCGC
AAAGGAGTCG AGATCGCGGT CAAGCAAGGG CAGGAAATTG TCGCTGCAGC CGCGGGTCGC
GTGACCTACA GCGGCAACGG TATCAAGGGA TACGGTAATC TGATAATTTT GAAACATGCC
GACGATTTTT TCACCGTGTA CGGATTCAAC AATAAAAACC TTGTGTCCAC CGGGACCTAT
GTCAGTAGGG GAGAGCATAT CGCTTCGGGA GGGTCTCCTC CCGGGTGTCG GGACGCGCGC
CTGCACTTTG AAATCAGGCA TGGCAAAAAT GCTTTGAACC CCGTCTCATG TCTGCCCTGA
 
Protein sequence
MLRCGFKGRR RRELWPGNVW RVGRTVLVLA LLCWLTGCSP PRGVYHTVKP GQTLYRIGRA 
YNVDTDRLAR INGIREPSQL KVGKRLFIPG ARNPKYVPAT VSSAQRNRPQ STVKKAAKTA
SSPRSRATAS RRQASVVKPS VKKNTPALKK TPVKSSLVKF IWPVRGKMVK SFGQQGYGGR
KGVEIAVKQG QEIVAAAAGR VTYSGNGIKG YGNLIILKHA DDFFTVYGFN NKNLVSTGTY
VSRGEHIASG GSPPGCRDAR LHFEIRHGKN ALNPVSCLP