Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1378 |
Symbol | |
ID | 3723494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1617258 |
End bp | 1618235 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637750968 |
Product | putative integrase |
Protein accession | YP_356795 |
Protein GI | 77918980 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.00372186 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATAC GGTTACACGC TAATGCCACA ACGACCCCGA AAATCCGACG ATATATCCAA GAGTCGGAAA AATCGCACAA GGCTTTAGCT AAAGAACTGG GCATATCCAT TGACACGGTA CGTCGCTGGC GCAAACGTGA CGATGTTCAC GATCGGTCTC ATACGGCACA CCGACTGAAT ACAACGATGA CCGAAGCCCA GGAAGCCGTT GTCATCGAGT TGCGTCGCTC TTTGTTGTTG TCTCTCGATG ATCTCCTGGT CGTCACTCGG GAATTTGTCA ATGCTGACGT CTCTCGTGCG GGACTTGACC GTTGTTTGCG ACGACATGGG GTATCCCGAT TGGCGGACCT GATCCCGAAA GAGGAAACGG CCAACAACAA GCCCAAAACA TTTAAAAACT ACGATCCGGG GTTCGTTCAT GTCGATATCA AATATTTGCC ACAGATGCCG GACGAAACCT CTCGGCGTTA CCTGTTTGTA GGCATCGACC GTGCTACCCG CTGGGTTTAC CTGGAAGTGT GCAAGAGCAA ATCCGCCCAA GCCGCAAAGG GCTTTTTGAA TCGCCTGGTA GCCAAAGCGC CATTTGTGAT CAAAAAATTG CTCACCGACA ACGACAAGGC ATTCACGGAT CGATTTTCCA CTGCTGGAGA GAGAAAGCCA ACAGGGAATC ATGTATTCGA CAAAACCTGC GTTCAGCATG GTATTGAACA TCGGCTTATT CCTCCACGCC ACCCTCAGAC CAACGGGATG GTTGAGCGAT TCAACGGTCG CATCAGCGAG GTTTTGGCAA CAACCCGGTT CGATTCCGCC GAAAATTTGG AGCAGACATT GTTACGTTAT GGTTATCTAT ACAACCAGCA TATTCCTCAG CGAGCGTTGG GGCATAAAGC TCCCATACAA GCGCTGAAGG ATTGGCAAAA AAAGAAACCA AAACTTTTCC GTAAACAGGT CAGGAATCAT GCGGGACCTG ACATGTAA
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Protein sequence | MTIRLHANAT TTPKIRRYIQ ESEKSHKALA KELGISIDTV RRWRKRDDVH DRSHTAHRLN TTMTEAQEAV VIELRRSLLL SLDDLLVVTR EFVNADVSRA GLDRCLRRHG VSRLADLIPK EETANNKPKT FKNYDPGFVH VDIKYLPQMP DETSRRYLFV GIDRATRWVY LEVCKSKSAQ AAKGFLNRLV AKAPFVIKKL LTDNDKAFTD RFSTAGERKP TGNHVFDKTC VQHGIEHRLI PPRHPQTNGM VERFNGRISE VLATTRFDSA ENLEQTLLRY GYLYNQHIPQ RALGHKAPIQ ALKDWQKKKP KLFRKQVRNH AGPDM
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