Gene Pcar_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1315 
Symbol 
ID3723578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp1537802 
End bp1538317 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content47% 
IMG OID637750904 
Producthypothetical protein 
Protein accessionYP_356734 
Protein GI77918919 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.155182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTGT TCGATTTCGC CATGCAAATG GAGACAGATG CTGAAGCATT TTATCGAAAA 
TTGGCCGGCA GAAGTCCCGT GGCCGGGATC AAGAAGATCT TTACCGATTT GGCCGAAGAT 
GAGCAGAAGC ATTACCAGAT TTTTCGTAAC CTGAAAAATG CCATGGTTTC CAAGGCATCG 
TTGGAATCCA GGGTGCTTGA AGATGCCAGG AATGTTTTTG CCGAATTGCT TGAAAAAAAA 
GCCGACGTTA CGATGATGCA GGATAACCTT GAAGGGTACC GCTATGCCAT GAAACTGGAG 
GCCGATGGCG CCCGGTTTTA TGAGGATGCT GCACGGCGGG AAGGGGATGC GGAGACCAGG 
ATGCTCTTGT TGCGTATTGC TAAAGAAGAG CGTCGTCATT TCAATATCGT TGAAAACGTT 
TATCGTTATG TCAACGCGCC GAATGAATAT CTGGCCTGGG TGGAGTTCAG CAATCTCGAT 
GAATTTCAAG CCTTTGGCAG GGATATTGAC CTGTAA
 
Protein sequence
MNVFDFAMQM ETDAEAFYRK LAGRSPVAGI KKIFTDLAED EQKHYQIFRN LKNAMVSKAS 
LESRVLEDAR NVFAELLEKK ADVTMMQDNL EGYRYAMKLE ADGARFYEDA ARREGDAETR 
MLLLRIAKEE RRHFNIVENV YRYVNAPNEY LAWVEFSNLD EFQAFGRDID L