Gene Pcar_1285 details

Gene Information

• Locus tag: Pcar_1285
• Symbol: gmk
• ID: 3723587
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1506607
• End bp: 1507239
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637750874
• Product: guanylate kinase
• Protein accession: YP_356704
• Protein GI: 77918889
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0194] Guanylate kinase
• TIGRFAM ID: [TIGR03263] guanylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.0000194386
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGAA ATGGCATCCT GTTTGTCATA TCCGCGCCGT CAGGTGCTGG TAAGACCTCA 
TTGTGTCGGC AGATTGTTGA CATTTTCCCC GATATGCGGC ACTCTATCTC CTTTACCACG 
CGTCCCCGTC GAAATGGCGA AACAGACGGT GTCGATTATC ACTTTGTCAC TCCGGAGGTT 
TTCGATACCA TGGTGGCGGA AGGTGCTTTC GCCGAATGGG CCAGGGTTCA CGGAAACTGC 
TACGGGACTG CACTGGCTAC CCTGCAGGAA GCACGTGAAC AGGGTCAGGA TCTGCTGCTG 
GATATCGATT GTCAGGGTGC GGCGCAGCTT AAGCGCAACT GCCCGGATGA CGTCTTTATT 
TTTATTTTGC CGCCGAGCTT CGAAGAACTT GAGCGCCGGT TGCGCGGGCG CAATACCGAT 
ACCGCCGAGG TCATTGCCCG ACGGCTGGAC AATGCTCGCC GCGAAATTCG CGAGTTGGTC 
TGGTATGATT ATCTCATCGT GAATGAGGAT CTGCCGCGTG CGGTGGAGGA ATTCAAGAGT 
ATTATCCTGG CAGAAGGCTG CAGGGCTTCA CGTATCAGAA GTGAGGCCGG CCGTCTGTTC 
GACATTGATA TGCAGGACAA TTCAACGATT TAA 

 

Protein sequence

MKRNGILFVI SAPSGAGKTS LCRQIVDIFP DMRHSISFTT RPRRNGETDG VDYHFVTPEV 
FDTMVAEGAF AEWARVHGNC YGTALATLQE AREQGQDLLL DIDCQGAAQL KRNCPDDVFI 
FILPPSFEEL ERRLRGRNTD TAEVIARRLD NARREIRELV WYDYLIVNED LPRAVEEFKS 
IILAEGCRAS RIRSEAGRLF DIDMQDNSTI